Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 AC018797.1-201ENST00000510791 255 ntBASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 IGHV3-57-201ENST00000520143 280 ntBASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 AC084121.1-201ENST00000533882 835 ntBASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 AC084033.1-201ENST00000550830 633 ntBASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 AC090888.3-201ENST00000558917 509 ntBASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 AC004805.3-201ENST00000603178 310 ntBASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 MIR6071-201ENST00000616741 78 ntBASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 AP003789.1-201ENST00000617737 605 ntBASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 AP001052.1-201ENST00000626421 99 ntBASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
NPIPA3F8WFD2 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NPIPA3F8WFD2 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NPIPA3F8WFD2 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NPIPA3F8WFD2 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.9□□□□□ -1.47
NPIPA3F8WFD2 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.9□□□□□ -1.47
NPIPA3F8WFD2 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NPIPA3F8WFD2 BRAFP1-201ENST00000445336 2703 ntBASIC5.9□□□□□ -1.47
NPIPA3F8WFD2 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 API5P1-201ENST00000424316 1510 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 RBBP4P5-201ENST00000398583 1266 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AL035696.2-201ENST00000407941 709 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AL359092.1-201ENST00000417156 265 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AL139415.1-201ENST00000424862 352 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 KATNBL1P2-201ENST00000433311 835 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 LDHAP2-201ENST00000437325 985 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 RPSAP40-201ENST00000442343 891 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 RN7SL362P-201ENST00000494228 267 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AC018645.1-201ENST00000505003 109 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AL078601.3-201ENST00000573303 535 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AL078623.1-201ENST00000602702 907 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 BUB1P1-201ENST00000603541 607 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AC087468.1-201ENST00000604365 630 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AL499605.1-201ENST00000604628 403 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AP005212.4-201ENST00000614206 710 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 uc_338.31-201ENST00000615595 186 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 MIR6778-201ENST00000617912 73 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 AC233968.1-201ENST00000611212 1300 ntBASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.89□□□□□ -1.47
NPIPA3F8WFD2 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 AC013488.1-201ENST00000526618 1838 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 DOCK11P1-201ENST00000553480 5932 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 GAPDHP59-201ENST00000435908 267 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 GM2AP2-201ENST00000491764 562 ntBASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.88□□□□□ -1.47
NPIPA3F8WFD2 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms