Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 MTND1P16-201ENST00000465177 898 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 AC009022.1-201ENST00000472115 496 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 HMGN1P10-201ENST00000474557 553 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 MTND6P6-201ENST00000478031 263 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 RN7SL464P-201ENST00000492743 297 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 AC139272.1-201ENST00000505516 640 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 AC022483.1-201ENST00000514020 567 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 IGHVII-78-1-201ENST00000521105 269 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 OR5AK3P-201ENST00000527486 1297 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 OR7K1P-201ENST00000546439 926 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 RBM22P12-201ENST00000567098 1255 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 AC009121.2-201ENST00000572913 714 ntTSL 3 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 AC116165.3-201ENST00000614524 400 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 OR8B9P-202ENST00000642028 5216 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 BCL9P1-201ENST00000506012 2561 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 AC007614.2-201ENST00000569877 1851 ntBASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PCDHB11Q9Y5F2 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AC110926.1-201ENST00000412499 2825 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 TARS2P1-201ENST00000506124 2041 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 METTL21EP-201ENST00000298105 713 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 CBX3P1-201ENST00000325243 554 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 RNA5SP427-201ENST00000365323 119 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 OR4F7P-201ENST00000402444 931 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 OR4F1P-201ENST00000405102 938 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 HMGB3P18-201ENST00000406327 590 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AC009237.5-201ENST00000414271 501 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 RPL21P32-201ENST00000419877 477 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 OR4F2P-201ENST00000424047 938 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 RPL19P21-201ENST00000424919 591 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 RPL12P4-201ENST00000432629 497 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 HMGB1P16-201ENST00000447155 540 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 OR52I1-201ENST00000450052 1050 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AC104849.1-201ENST00000462623 405 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 PSAT1P4-201ENST00000466500 526 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 RPS3AP17-201ENST00000472594 777 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 RPL12P32-201ENST00000484010 494 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AC093824.1-201ENST00000508796 343 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 ENPP7P3-201ENST00000509123 241 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 SETP21-201ENST00000514799 892 ntBASIC7.95□□□□□ -1.14
PCDHB11Q9Y5F2 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms