Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 U3.52-201ENST00000384034 216 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AL353133.1-201ENST00000407695 401 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 H3F3BP1-201ENST00000440551 403 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AL161722.1-201ENST00000446972 1032 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AC128716.1-201ENST00000475129 166 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 RPL19P11-201ENST00000495944 589 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AC022206.1-201ENST00000495947 347 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AC138409.2-202ENST00000507274 458 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 SCARNA5-201ENST00000516201 276 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AC024255.1-201ENST00000614376 102 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 MIR6849-201ENST00000618543 69 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 MIR7854-201ENST00000620068 65 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 RAB28P4-201ENST00000622233 665 ntBASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RHBDD3Q9Y3P4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 DNM1P47-203ENST00000571780 12667 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 LCN1P2-201ENST00000372030 223 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 RPL12P23-201ENST00000405880 490 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 U3.43-201ENST00000410734 213 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 CDC42P6-201ENST00000421246 576 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 RPL23AP85-201ENST00000421838 433 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 SPATA20P1-201ENST00000423089 438 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 VN1R53P-201ENST00000429536 957 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AC003989.1-201ENST00000434569 565 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 SNX18P26-201ENST00000458433 740 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AC009567.2-201ENST00000502989 349 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AC091965.3-201ENST00000506236 208 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 OR7E158P-201ENST00000524483 910 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AC023310.2-201ENST00000553844 547 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AC005519.1-201ENST00000554490 601 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 RPL29P33-201ENST00000587474 316 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AL162377.2-201ENST00000624532 337 ntBASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
RHBDD3Q9Y3P4 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RHBDD3Q9Y3P4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RHBDD3Q9Y3P4 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
RHBDD3Q9Y3P4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms