Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CLIP2Q9UDT6 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 DOCK11P1-201ENST00000553480 5932 ntBASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 SAGE3P-201ENST00000619800 1635 ntBASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 AL451142.1-201ENST00000375867 775 ntBASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 AC002127.1-201ENST00000421305 225 ntBASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 OSTCP4-201ENST00000424397 449 ntBASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 AC099782.1-201ENST00000425889 474 ntBASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 AL139156.3-201ENST00000454802 394 ntBASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 CCNJP2-201ENST00000457810 1163 ntBASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 CTSLP6-201ENST00000458273 1002 ntBASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 RN7SL170P-201ENST00000487098 295 ntBASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 AL109924.4-201ENST00000623089 670 ntBASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 AC073593.1-201ENST00000624500 411 ntBASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 AP003486.1-201ENST00000525716 3994 ntBASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 CAP1P2-201ENST00000417455 1409 ntBASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 TMCC1P1-201ENST00000518897 1980 ntBASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
CLIP2Q9UDT6 CASC19-246ENST00000641625 1606 ntBASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 STAG3L4-201ENST00000352103 530 ntBASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 YWHAZP6-201ENST00000399764 738 ntBASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 AC011853.1-201ENST00000518911 454 ntBASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 BCAS2P1-201ENST00000528022 632 ntBASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
CLIP2Q9UDT6 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 AC073365.1-203ENST00000641055 1992 ntBASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 RN7SKP237-201ENST00000364663 301 ntBASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 MIR188-201ENST00000385034 86 ntBASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 RBBP4P5-201ENST00000398583 1266 ntBASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 DHFRP2-201ENST00000414224 547 ntBASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.55□□□□□ -1.2
CLIP2Q9UDT6 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms