Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL355032.1-201ENST00000472981 438 ntBASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 IGHVII-49-1-201ENST00000521760 224 ntBASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 MTCO1P40-201ENST00000574371 625 ntBASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 MIR3159-201ENST00000584572 74 ntBASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AC006116.6-201ENST00000593258 1103 ntBASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 ZNF92P3-201ENST00000596594 954 ntBASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 MRPS35P3-201ENST00000603189 709 ntBASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AC108359.1-201ENST00000616451 1211 ntBASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AC068860.1-201ENST00000623701 3736 ntBASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 AL353743.3-201ENST00000442109 1468 ntBASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 QRSL1P3-201ENST00000552666 1316 ntBASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 VPS35P1-201ENST00000563400 1518 ntBASIC8.24□□□□□ -1.09
TRAIPQ9BWF2 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 GCNA-202ENST00000373696 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 SNORD116-8-201ENST00000384365 95 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 AL356131.1-201ENST00000405826 414 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 RPSAP72-201ENST00000407020 358 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 OR5P4P-201ENST00000424698 917 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 CDY14P-201ENST00000431260 1014 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 CDY12P-201ENST00000440679 1015 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 AC092647.3-201ENST00000443044 633 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 CDY13P-201ENST00000445813 1015 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 HMGB1P48-201ENST00000446155 598 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 CDY23P-201ENST00000451661 1014 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 RPL36AP55-201ENST00000454114 305 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 ATG12P2-201ENST00000456830 416 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 NDUFA5P9-201ENST00000472609 340 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 TRBV8-2-201ENST00000475637 270 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 AC008799.2-201ENST00000484429 647 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 AC018639.1-201ENST00000492994 442 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 OR5H7P-201ENST00000514084 930 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 SNX18P27-201ENST00000523611 779 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 AC069304.3-201ENST00000603938 1084 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 AC243830.2-201ENST00000618067 630 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 VN1R7P-201ENST00000619242 903 ntBASIC8.23□□□□□ -1.09
TRAIPQ9BWF2 AC090643.1-201ENST00000623600 3100 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms