Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL359704.1-201ENST00000411586 781 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 HSPE1P16-201ENST00000426640 348 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 AC019197.1-207ENST00000431341 635 ntTSL 3 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 AC024082.2-201ENST00000434771 238 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 AL136982.6-201ENST00000444180 1238 ntTSL 2 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 RN7SL791P-201ENST00000467868 295 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 LINC00544-202ENST00000481738 575 ntTSL 3 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 CDH12P2-201ENST00000504393 298 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 ENPP7P1-201ENST00000509557 999 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 AC022296.1-201ENST00000512176 682 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 AC106800.2-201ENST00000514009 1103 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 IMPA1P1-202ENST00000522318 332 ntTSL 2 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 AC011767.1-203ENST00000559762 529 ntTSL 5 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 AL845331.3-202ENST00000562856 261 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 BNIP3P23-201ENST00000599655 511 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 AC007621.1-201ENST00000604544 437 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 AC113139.1-201ENST00000605049 239 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 AC113349.2-201ENST00000607804 377 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 AC012511.1-201ENST00000608140 449 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 KHDC1-206ENST00000610330 632 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 AL109614.1-201ENST00000620327 419 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 AC129778.1-202ENST00000623812 261 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 AL591379.1-207ENST00000635982 261 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 PTPN20-205ENST00000395721 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 SLC6A2-206ENST00000567238 3160 ntTSL 2 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 STMND1-203ENST00000536551 1322 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 FHL1-230ENST00000630084 1335 ntTSL 2 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 USP32P1-201ENST00000341745 3233 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 CU634019.3-201ENST00000623962 2456 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 FP236315.2-201ENST00000624506 2456 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 FP671120.2-201ENST00000624806 2456 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 EYA3-201ENST00000373863 1729 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 GOSR2-220ENST00000638838 3266 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 MAPK10-371ENST00000641952 5209 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.94□□□□□ -1.14
USB1Q9BQ65 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 AC100871.1-201ENST00000507871 1456 ntBASIC7.94□□□□□ -1.14
USB1Q9BQ65 FLT1-206ENST00000615611 1476 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
USB1Q9BQ65 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 HCG18-244ENST00000602516 2890 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 RN7SKP23-201ENST00000625159 4301 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 ABI1-208ENST00000376160 3515 ntAPPRIS ALT1 TSL 5 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USB1Q9BQ65 AC003985.2-201ENST00000562268 1669 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 ZSCAN23-201ENST00000289788 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
USB1Q9BQ65 ZNF610-203ENST00000403906 2191 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
USB1Q9BQ65 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC7.93□□□□□ -1.14
USB1Q9BQ65 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
USB1Q9BQ65 AC006511.3-201ENST00000624929 1783 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 MBP-206ENST00000397863 4800 ntTSL 3 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 AP000769.1-204ENST00000309775 800 ntTSL 5 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 OR52B1P-201ENST00000316506 909 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
USB1Q9BQ65 RNU6-451P-201ENST00000362921 107 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 Y_RNA.128-201ENST00000363391 112 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 VTRNA1-2-201ENST00000365241 89 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
USB1Q9BQ65 EIF4A1P8-201ENST00000394444 1190 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 PEX12P1-201ENST00000400284 1048 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 RNU6-195P-201ENST00000411352 109 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 OR9R1P-201ENST00000412200 877 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 NUP35P1-201ENST00000422734 947 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 ISCA1P6-201ENST00000427740 390 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 AC104772.1-201ENST00000444764 862 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 AL157714.1-201ENST00000448964 625 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 NPM1P39-201ENST00000449818 867 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 AC092570.2-201ENST00000452117 1143 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 RNU6-420P-201ENST00000458780 107 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 GAPDHP50-201ENST00000464421 993 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 NPY6R-201ENST00000503807 1112 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 MTND5P4-201ENST00000514978 288 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 SAP30L-AS1-204ENST00000524264 1039 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
USB1Q9BQ65 AP002360.1-204ENST00000529331 700 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 AP003396.2-201ENST00000533726 1297 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 LRTOMT-216ENST00000539271 570 ntTSL 4 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 HIGD1AP9-201ENST00000550710 279 ntBASIC7.93□□□□□ -1.14
USB1Q9BQ65 AC024270.3-201ENST00000565513 396 ntTSL 3 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC7.93□□□□□ -1.14
USB1Q9BQ65 NRBF2P1-201ENST00000587407 859 ntBASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms