Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 RPS10P21-201ENST00000430654 475 ntBASIC4.74□□□□□ -1.65
AP1S3Q96PC3 NIP7P1-201ENST00000433227 512 ntBASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AC007790.1-201ENST00000439081 782 ntBASIC4.74□□□□□ -1.65
AP1S3Q96PC3 PRKAR1AP1-201ENST00000441422 1162 ntBASIC4.74□□□□□ -1.65
AP1S3Q96PC3 CYCSP51-201ENST00000443545 318 ntBASIC4.74□□□□□ -1.65
AP1S3Q96PC3 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AL355032.1-201ENST00000472981 438 ntBASIC4.74□□□□□ -1.65
AP1S3Q96PC3 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 PVT1-214ENST00000522875 922 ntTSL 5 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 MIR5705-201ENST00000579870 89 ntBASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AL589765.5-201ENST00000596133 515 ntBASIC4.74□□□□□ -1.65
AP1S3Q96PC3 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 BTK-209ENST00000618050 2417 ntTSL 5 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.74□□□□□ -1.65
AP1S3Q96PC3 AC011815.2-201ENST00000618230 2021 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AC023245.2-201ENST00000530760 2978 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 RNA5SP453-201ENST00000362503 119 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 SNORA5.1-201ENST00000384275 131 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 NACAP7-201ENST00000407371 609 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AL451061.1-201ENST00000407887 862 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 UBE2V1P14-201ENST00000415815 558 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 SPATA20P1-201ENST00000423089 438 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AL357632.1-201ENST00000426688 643 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AC079922.1-201ENST00000443291 359 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 SRP68P2-201ENST00000456184 254 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 MORF4L2P1-201ENST00000503761 858 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AC136777.2-201ENST00000522979 358 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 PPIAP6-201ENST00000557078 499 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 MIR1273F-201ENST00000580581 99 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 PTCHD3P1-201ENST00000612350 537 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 AC109446.4-201ENST00000623235 2755 ntBASIC4.73□□□□□ -1.65
AP1S3Q96PC3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 CREM-217ENST00000439705 2306 ntTSL 5 BASIC4.73□□□□□ -1.65
AP1S3Q96PC3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms