Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC067773.1-201ENST00000603284 1094 ntBASIC8.79□□□□□ -1
CCDC7Q96M83 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC8.79□□□□□ -1
CCDC7Q96M83 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC8.79□□□□□ -1
CCDC7Q96M83 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
CCDC7Q96M83 AL353763.1-201ENST00000624467 1628 ntBASIC8.79□□□□□ -1
CCDC7Q96M83 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC8.79□□□□□ -1
CCDC7Q96M83 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC8.79□□□□□ -1
CCDC7Q96M83 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
CCDC7Q96M83 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.79□□□□□ -1
CCDC7Q96M83 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CCDC7Q96M83 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
CCDC7Q96M83 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CCDC7Q96M83 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CCDC7Q96M83 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC8.78□□□□□ -1
CCDC7Q96M83 CASC19-246ENST00000641625 1606 ntBASIC8.78□□□□□ -1
CCDC7Q96M83 RNU11-6P-201ENST00000391127 133 ntBASIC8.78□□□□□ -1
CCDC7Q96M83 AP003170.5-201ENST00000397185 335 ntBASIC8.78□□□□□ -1
CCDC7Q96M83 AL445238.1-204ENST00000400311 463 ntBASIC8.78□□□□□ -1
CCDC7Q96M83 RN7SKP121-201ENST00000410842 305 ntBASIC8.78□□□□□ -1
CCDC7Q96M83 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC8.78□□□□□ -1
CCDC7Q96M83 AL354707.3-201ENST00000427308 331 ntBASIC8.78□□□□□ -1
CCDC7Q96M83 RPL12P31-201ENST00000478433 450 ntBASIC8.78□□□□□ -1
CCDC7Q96M83 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC8.78□□□□□ -1
CCDC7Q96M83 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC8.78□□□□□ -1
CCDC7Q96M83 OR4D12P-201ENST00000509361 911 ntBASIC8.78□□□□□ -1
CCDC7Q96M83 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC8.78□□□□□ -1
CCDC7Q96M83 NPIPB14P-203ENST00000532298 987 ntBASIC8.78□□□□□ -1
CCDC7Q96M83 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC8.78□□□□□ -1
CCDC7Q96M83 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC8.78□□□□□ -1
CCDC7Q96M83 OR4H6P-201ENST00000563771 921 ntBASIC8.78□□□□□ -1
CCDC7Q96M83 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC8.78□□□□□ -1
CCDC7Q96M83 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC8.78□□□□□ -1
CCDC7Q96M83 AP000894.4-201ENST00000610185 483 ntBASIC8.78□□□□□ -1
CCDC7Q96M83 AL096712.1-201ENST00000614561 159 ntBASIC8.78□□□□□ -1
CCDC7Q96M83 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC8.78□□□□□ -1
CCDC7Q96M83 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
CCDC7Q96M83 VN2R1P-201ENST00000449668 1743 ntBASIC8.78□□□□□ -1
CCDC7Q96M83 AC006511.3-201ENST00000624929 1783 ntBASIC8.78□□□□□ -1
CCDC7Q96M83 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CCDC7Q96M83 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
CCDC7Q96M83 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC8.78□□□□□ -1
CCDC7Q96M83 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC8.78□□□□□ -1
CCDC7Q96M83 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
CCDC7Q96M83 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC8.78□□□□□ -1
CCDC7Q96M83 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC8.78□□□□□ -1
CCDC7Q96M83 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CCDC7Q96M83 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
CCDC7Q96M83 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC8.78□□□□□ -1
CCDC7Q96M83 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
CCDC7Q96M83 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
CCDC7Q96M83 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
CCDC7Q96M83 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
CCDC7Q96M83 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CCDC7Q96M83 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CCDC7Q96M83 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 RNA5SP478-201ENST00000364657 115 ntBASIC8.77□□□□□ -1.01
CCDC7Q96M83 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 TMA16P2-201ENST00000413187 601 ntBASIC8.77□□□□□ -1.01
CCDC7Q96M83 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 AC068228.1-201ENST00000461723 211 ntBASIC8.77□□□□□ -1.01
CCDC7Q96M83 FAU-203ENST00000525297 355 ntTSL 5 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 NANOGNBP2-201ENST00000544753 553 ntBASIC8.77□□□□□ -1.01
CCDC7Q96M83 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 AC090115.2-201ENST00000548060 883 ntBASIC8.77□□□□□ -1.01
CCDC7Q96M83 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 AC090826.1-203ENST00000569235 490 ntBASIC8.77□□□□□ -1.01
CCDC7Q96M83 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CCDC7Q96M83 AC091167.5-201ENST00000605689 894 ntBASIC8.77□□□□□ -1.01
CCDC7Q96M83 AL512356.3-201ENST00000623005 461 ntBASIC8.77□□□□□ -1.01
CCDC7Q96M83 SNX18P12-201ENST00000624821 759 ntBASIC8.77□□□□□ -1.01
CCDC7Q96M83 AC073488.6-201ENST00000632293 754 ntBASIC8.77□□□□□ -1.01
CCDC7Q96M83 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CCDC7Q96M83 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CCDC7Q96M83 FO393409.1-201ENST00000399325 1372 ntBASIC8.77□□□□□ -1.01
CCDC7Q96M83 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CCDC7Q96M83 Z93929.1-201ENST00000418200 1475 ntBASIC8.77□□□□□ -1.01
CCDC7Q96M83 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CCDC7Q96M83 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CCDC7Q96M83 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CCDC7Q96M83 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CCDC7Q96M83 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC8.77□□□□□ -1.01
CCDC7Q96M83 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CCDC7Q96M83 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CCDC7Q96M83 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.76□□□□□ -1.01
CCDC7Q96M83 AC004386.1-201ENST00000393214 761 ntBASIC8.76□□□□□ -1.01
CCDC7Q96M83 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC8.76□□□□□ -1.01
CCDC7Q96M83 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC8.76□□□□□ -1.01
CCDC7Q96M83 EMC3-AS1-205ENST00000438698 534 ntBASIC8.76□□□□□ -1.01
CCDC7Q96M83 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms