Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 RBBP4P5-201ENST00000398583 1266 ntBASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 LYPLA1P3-201ENST00000402650 695 ntBASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 AC005332.4-201ENST00000592752 579 ntBASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 SMIM12P1-201ENST00000603004 274 ntBASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SHROOM3Q8TF72 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 MIR188-201ENST00000385034 86 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 SNORA77.2-201ENST00000408571 112 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 RPL36P18-201ENST00000419316 318 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 IPPKP1-201ENST00000422501 768 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 AC007998.1-201ENST00000474156 672 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 RN7SL174P-201ENST00000475578 289 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 RPA2P3-201ENST00000533268 770 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 MIR4301-201ENST00000577203 66 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 GLYATL1P2-202ENST00000588046 902 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 AC008521.2-201ENST00000591021 259 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 RPSAP75-201ENST00000605848 301 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 MIR7159-201ENST00000620587 66 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 LINC02495-203ENST00000636704 242 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 TMCC1P1-201ENST00000518897 1980 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 FAM32BP-201ENST00000344033 333 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 GAPDHP48-201ENST00000436626 961 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 AC023818.1-201ENST00000498379 384 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 AC009879.1-201ENST00000520029 839 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 CYCSP25-201ENST00000525280 316 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 AC079905.1-201ENST00000549280 475 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 AL136097.3-201ENST00000611097 505 ntBASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.48□□□□□ -1.37
SHROOM3Q8TF72 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 AL353743.3-201ENST00000442109 1468 ntBASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 OLMALINC-203ENST00000641087 3779 ntBASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
SHROOM3Q8TF72 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms