Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 DMBT1-205ENST00000368955 7656 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 NCOA4P3-201ENST00000513203 1877 ntBASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 AL592429.1-201ENST00000403909 1473 ntBASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 RN7SKP128-201ENST00000364270 303 ntBASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 EEF1A1P29-201ENST00000416082 1096 ntBASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 AL450996.1-201ENST00000445574 1202 ntBASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 RPS3AP15-201ENST00000483874 781 ntBASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 AC253576.1-201ENST00000511645 1156 ntBASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 MIR8080-201ENST00000622224 89 ntBASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
COL22A1Q8NFW1 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.11
COL22A1Q8NFW1 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.15□□□□□ -1.11
COL22A1Q8NFW1 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
COL22A1Q8NFW1 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.11
COL22A1Q8NFW1 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
COL22A1Q8NFW1 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
COL22A1Q8NFW1 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
COL22A1Q8NFW1 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
COL22A1Q8NFW1 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
COL22A1Q8NFW1 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 RN7SKP103-201ENST00000363848 320 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 MIR541-201ENST00000401360 84 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 RPL35AP24-201ENST00000413846 330 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 RPS15AP30-201ENST00000420976 390 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 DUTP4-201ENST00000424782 475 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 EEF1B2P5-201ENST00000444820 548 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 AC073850.1-201ENST00000449243 255 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 SNORA43.3-201ENST00000517240 103 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 IGBP1P1-201ENST00000554337 1009 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 MIR6820-201ENST00000611508 62 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 AC025470.1-201ENST00000510053 2032 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 METTL15P3-201ENST00000415522 1221 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 TNPO1P1-201ENST00000423641 1138 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 AL139156.3-201ENST00000454802 394 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 RN7SL583P-201ENST00000475692 287 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 AC109481.1-201ENST00000509173 282 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 AC084337.1-201ENST00000524809 686 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 MIR3189-201ENST00000578735 73 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 MIR8089-201ENST00000620165 82 ntBASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
COL22A1Q8NFW1 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC8.13□□□□□ -1.11
COL22A1Q8NFW1 SALL4P7-201ENST00000555779 3120 ntBASIC8.13□□□□□ -1.11
COL22A1Q8NFW1 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
COL22A1Q8NFW1 AC020978.8-201ENST00000571975 3022 ntBASIC8.13□□□□□ -1.11
COL22A1Q8NFW1 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
COL22A1Q8NFW1 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
COL22A1Q8NFW1 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.13□□□□□ -1.11
COL22A1Q8NFW1 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
COL22A1Q8NFW1 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC8.13□□□□□ -1.11
COL22A1Q8NFW1 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
COL22A1Q8NFW1 MIR550A3-201ENST00000390735 95 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms