Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
CDCA8Q53HL2 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC9.46□□□□□ -0.9
CDCA8Q53HL2 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC9.46□□□□□ -0.9
CDCA8Q53HL2 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
CDCA8Q53HL2 AL034417.4-202ENST00000642135 2236 ntBASIC9.46□□□□□ -0.9
CDCA8Q53HL2 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 CA10-204ENST00000570565 2276 ntTSL 5 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 AC119751.3-201ENST00000399720 670 ntBASIC9.45□□□□□ -0.9
CDCA8Q53HL2 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 AC096533.1-201ENST00000411645 353 ntBASIC9.45□□□□□ -0.9
CDCA8Q53HL2 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 AC096644.3-201ENST00000416788 338 ntBASIC9.45□□□□□ -0.9
CDCA8Q53HL2 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 AC245047.2-201ENST00000441060 530 ntBASIC9.45□□□□□ -0.9
CDCA8Q53HL2 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 Z99127.2-201ENST00000441426 334 ntBASIC9.45□□□□□ -0.9
CDCA8Q53HL2 SNRPBP1-201ENST00000443634 282 ntBASIC9.45□□□□□ -0.9
CDCA8Q53HL2 AC008379.1-201ENST00000463655 464 ntBASIC9.45□□□□□ -0.9
CDCA8Q53HL2 RN7SL382P-201ENST00000482631 282 ntBASIC9.45□□□□□ -0.9
CDCA8Q53HL2 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 HMGB1P47-201ENST00000511281 589 ntBASIC9.45□□□□□ -0.9
CDCA8Q53HL2 AC140063.1-201ENST00000541343 259 ntBASIC9.45□□□□□ -0.9
CDCA8Q53HL2 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 HNRNPA3P9-201ENST00000604913 979 ntBASIC9.45□□□□□ -0.9
CDCA8Q53HL2 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 Z97989.1-201ENST00000531702 2421 ntBASIC9.45□□□□□ -0.9
CDCA8Q53HL2 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
CDCA8Q53HL2 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 AC010894.1-201ENST00000313760 361 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 RNU1-5P-201ENST00000362684 144 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 SNORA70.3-201ENST00000365075 132 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 RPL5P19-201ENST00000404228 893 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 AL355615.1-201ENST00000406187 641 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 MIR1266-201ENST00000408125 84 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 CDC42P6-201ENST00000421246 576 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 MTND2P21-201ENST00000436242 1042 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 SNRPFP2-201ENST00000440710 251 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 AL355355.1-201ENST00000442900 793 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 CRYGGP-201ENST00000443337 145 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 SETD6P1-201ENST00000444575 317 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 LAPTM4BP1-201ENST00000447781 690 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 RPS3AP49-201ENST00000472161 790 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 OR2A3P-201ENST00000493774 953 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 PPM1AP1-201ENST00000502740 1135 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 SUMO2P5-201ENST00000506790 245 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 AC112518.2-201ENST00000508565 425 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 MTND3P13-201ENST00000574391 343 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 DHFRP1-201ENST00000579682 559 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 AC110760.3-201ENST00000598794 467 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 AL512506.2-201ENST00000624472 458 ntBASIC9.44□□□□□ -0.9
CDCA8Q53HL2 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC9.44□□□□□ -0.9
CDCA8Q53HL2 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms