Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
UBE3AQ05086 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.3
UBE3AQ05086 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.96□□□□□ -1.3
UBE3AQ05086 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.96□□□□□ -1.3
UBE3AQ05086 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
UBE3AQ05086 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
UBE3AQ05086 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.95□□□□□ -1.3
UBE3AQ05086 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.95□□□□□ -1.3
UBE3AQ05086 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.95□□□□□ -1.3
UBE3AQ05086 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.95□□□□□ -1.3
UBE3AQ05086 AL359694.2-201ENST00000567753 1615 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.95□□□□□ -1.3
UBE3AQ05086 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
UBE3AQ05086 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.95□□□□□ -1.3
UBE3AQ05086 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
UBE3AQ05086 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
UBE3AQ05086 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
UBE3AQ05086 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
UBE3AQ05086 AL049697.3-201ENST00000406493 982 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 HMGN1P20-201ENST00000411849 300 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
UBE3AQ05086 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.95□□□□□ -1.3
UBE3AQ05086 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
UBE3AQ05086 IGLV3-4-201ENST00000432300 244 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.95□□□□□ -1.3
UBE3AQ05086 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.95□□□□□ -1.3
UBE3AQ05086 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.95□□□□□ -1.3
UBE3AQ05086 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.95□□□□□ -1.3
UBE3AQ05086 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.95□□□□□ -1.3
UBE3AQ05086 OR2A3P-201ENST00000493774 953 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 RN7SL104P-201ENST00000498686 293 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.95□□□□□ -1.3
UBE3AQ05086 COX6B1P4-201ENST00000519826 484 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.95□□□□□ -1.3
UBE3AQ05086 TRIM77BP-201ENST00000524985 1119 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 OR9L1P-201ENST00000529493 933 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 AC036111.2-201ENST00000533247 901 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.95□□□□□ -1.3
UBE3AQ05086 CYCSP38-201ENST00000559840 322 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.95□□□□□ -1.3
UBE3AQ05086 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 AL049840.6-201ENST00000604583 345 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.95□□□□□ -1.3
UBE3AQ05086 AF117829.2-201ENST00000619538 361 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 AL450226.2-201ENST00000622913 439 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 AC018692.2-201ENST00000624130 348 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.95□□□□□ -1.3
UBE3AQ05086 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.95□□□□□ -1.3
UBE3AQ05086 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.95□□□□□ -1.3
UBE3AQ05086 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.95□□□□□ -1.3
UBE3AQ05086 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
UBE3AQ05086 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.95□□□□□ -1.3
UBE3AQ05086 AC122713.2-201ENST00000624942 3335 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.95□□□□□ -1.3
UBE3AQ05086 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.95□□□□□ -1.3
UBE3AQ05086 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
UBE3AQ05086 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
UBE3AQ05086 AC079949.2-201ENST00000617117 2933 ntBASIC6.94□□□□□ -1.3
UBE3AQ05086 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.94□□□□□ -1.3
UBE3AQ05086 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
UBE3AQ05086 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
UBE3AQ05086 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.94□□□□□ -1.3
UBE3AQ05086 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.94□□□□□ -1.3
UBE3AQ05086 AC016251.2-201ENST00000623393 3089 ntBASIC6.94□□□□□ -1.3
UBE3AQ05086 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UBE3AQ05086 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
UBE3AQ05086 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.94□□□□□ -1.3
UBE3AQ05086 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
UBE3AQ05086 DUTP4-201ENST00000424782 475 ntBASIC6.94□□□□□ -1.3
UBE3AQ05086 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.94□□□□□ -1.3
UBE3AQ05086 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.94□□□□□ -1.3
UBE3AQ05086 AL512637.1-201ENST00000439523 1231 ntBASIC6.94□□□□□ -1.3
UBE3AQ05086 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.94□□□□□ -1.3
UBE3AQ05086 CXCR2P1-202ENST00000443392 1074 ntBASIC6.94□□□□□ -1.3
UBE3AQ05086 MTCYBP14-201ENST00000457471 715 ntBASIC6.94□□□□□ -1.3
UBE3AQ05086 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.94□□□□□ -1.3
UBE3AQ05086 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.94□□□□□ -1.3
UBE3AQ05086 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.94□□□□□ -1.3
UBE3AQ05086 KHDC1P1-201ENST00000511053 508 ntBASIC6.94□□□□□ -1.3
UBE3AQ05086 SNORA81.2-201ENST00000516868 170 ntBASIC6.94□□□□□ -1.3
UBE3AQ05086 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.94□□□□□ -1.3
UBE3AQ05086 AC004232.1-201ENST00000571388 208 ntBASIC6.94□□□□□ -1.3
UBE3AQ05086 MIR4701-201ENST00000583094 63 ntBASIC6.94□□□□□ -1.3
UBE3AQ05086 AC008507.3-201ENST00000585753 472 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms