Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.19□□□□□ -1.42
RAE1P78406 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.19□□□□□ -1.42
RAE1P78406 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RAE1P78406 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.19□□□□□ -1.42
RAE1P78406 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RAE1P78406 AC067942.1-201ENST00000488045 1493 ntBASIC6.19□□□□□ -1.42
RAE1P78406 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RAE1P78406 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.19□□□□□ -1.42
RAE1P78406 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.19□□□□□ -1.42
RAE1P78406 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RAE1P78406 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RAE1P78406 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RAE1P78406 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RAE1P78406 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RAE1P78406 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RAE1P78406 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RAE1P78406 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
RAE1P78406 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RAE1P78406 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RAE1P78406 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.19□□□□□ -1.42
RAE1P78406 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
RAE1P78406 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RAE1P78406 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RAE1P78406 CASC19-255ENST00000641733 1385 ntBASIC6.18□□□□□ -1.42
RAE1P78406 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.18□□□□□ -1.42
RAE1P78406 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.18□□□□□ -1.42
RAE1P78406 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.18□□□□□ -1.42
RAE1P78406 AP004289.1-201ENST00000436307 2205 ntBASIC6.18□□□□□ -1.42
RAE1P78406 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 RBPJP6-201ENST00000411556 1431 ntBASIC6.18□□□□□ -1.42
RAE1P78406 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.18□□□□□ -1.42
RAE1P78406 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.18□□□□□ -1.42
RAE1P78406 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.18□□□□□ -1.42
RAE1P78406 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.18□□□□□ -1.42
RAE1P78406 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RAE1P78406 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 AC107977.1-201ENST00000355745 939 ntBASIC6.18□□□□□ -1.42
RAE1P78406 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RAE1P78406 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.18□□□□□ -1.42
RAE1P78406 ZNF37CP-201ENST00000406795 241 ntBASIC6.18□□□□□ -1.42
RAE1P78406 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 MEAF6P1-201ENST00000416092 327 ntBASIC6.18□□□□□ -1.42
RAE1P78406 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RAE1P78406 AC073464.3-201ENST00000422564 712 ntBASIC6.18□□□□□ -1.42
RAE1P78406 GTF3AP6-201ENST00000432585 986 ntBASIC6.18□□□□□ -1.42
RAE1P78406 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.18□□□□□ -1.42
RAE1P78406 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.18□□□□□ -1.42
RAE1P78406 TREML3P-201ENST00000457327 501 ntBASIC6.18□□□□□ -1.42
RAE1P78406 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.18□□□□□ -1.42
RAE1P78406 RN7SL350P-201ENST00000492591 299 ntBASIC6.18□□□□□ -1.42
RAE1P78406 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.18□□□□□ -1.42
RAE1P78406 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.18□□□□□ -1.42
RAE1P78406 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.18□□□□□ -1.42
RAE1P78406 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.18□□□□□ -1.42
RAE1P78406 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.18□□□□□ -1.42
RAE1P78406 AC009879.1-201ENST00000520029 839 ntBASIC6.18□□□□□ -1.42
RAE1P78406 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
RAE1P78406 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.18□□□□□ -1.42
RAE1P78406 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC6.18□□□□□ -1.42
RAE1P78406 AC244034.2-201ENST00000562504 509 ntBASIC6.18□□□□□ -1.42
RAE1P78406 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.18□□□□□ -1.42
RAE1P78406 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.18□□□□□ -1.42
RAE1P78406 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.18□□□□□ -1.42
RAE1P78406 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.18□□□□□ -1.42
RAE1P78406 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.18□□□□□ -1.42
RAE1P78406 BNIP3P40-201ENST00000596017 556 ntBASIC6.18□□□□□ -1.42
RAE1P78406 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.18□□□□□ -1.42
RAE1P78406 BNIP3P31-201ENST00000604515 566 ntBASIC6.18□□□□□ -1.42
RAE1P78406 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.18□□□□□ -1.42
RAE1P78406 AL391834.2-201ENST00000609982 546 ntBASIC6.18□□□□□ -1.42
RAE1P78406 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.18□□□□□ -1.42
RAE1P78406 AP003789.1-201ENST00000617737 605 ntBASIC6.18□□□□□ -1.42
RAE1P78406 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.18□□□□□ -1.42
RAE1P78406 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.18□□□□□ -1.42
RAE1P78406 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RAE1P78406 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RAE1P78406 AC105235.1-201ENST00000623208 1816 ntBASIC6.18□□□□□ -1.42
RAE1P78406 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RAE1P78406 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms