Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC8.25□□□□□ -1.09
RIPK4P57078 RPL34P33-201ENST00000486062 334 ntBASIC8.25□□□□□ -1.09
RIPK4P57078 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC8.25□□□□□ -1.09
RIPK4P57078 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC8.25□□□□□ -1.09
RIPK4P57078 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC8.25□□□□□ -1.09
RIPK4P57078 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC8.25□□□□□ -1.09
RIPK4P57078 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
RIPK4P57078 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC8.25□□□□□ -1.09
RIPK4P57078 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.25□□□□□ -1.09
RIPK4P57078 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC8.25□□□□□ -1.09
RIPK4P57078 AC124916.2-201ENST00000604416 224 ntBASIC8.25□□□□□ -1.09
RIPK4P57078 AL591167.1-201ENST00000607321 456 ntBASIC8.25□□□□□ -1.09
RIPK4P57078 MIR7109-201ENST00000613748 65 ntBASIC8.25□□□□□ -1.09
RIPK4P57078 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
RIPK4P57078 AL357140.4-201ENST00000636827 412 ntBASIC8.25□□□□□ -1.09
RIPK4P57078 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
RIPK4P57078 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
RIPK4P57078 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
RIPK4P57078 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC8.25□□□□□ -1.09
RIPK4P57078 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
RIPK4P57078 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.25□□□□□ -1.09
RIPK4P57078 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC8.24□□□□□ -1.09
RIPK4P57078 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.24□□□□□ -1.09
RIPK4P57078 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
RIPK4P57078 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.24□□□□□ -1.09
RIPK4P57078 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC8.24□□□□□ -1.09
RIPK4P57078 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIPK4P57078 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIPK4P57078 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
RIPK4P57078 RNA5SP110-201ENST00000362638 115 ntBASIC8.24□□□□□ -1.09
RIPK4P57078 UBE2V1P14-201ENST00000415815 558 ntBASIC8.24□□□□□ -1.09
RIPK4P57078 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC8.24□□□□□ -1.09
RIPK4P57078 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIPK4P57078 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC8.24□□□□□ -1.09
RIPK4P57078 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC8.24□□□□□ -1.09
RIPK4P57078 HIGD1AP16-201ENST00000450986 258 ntBASIC8.24□□□□□ -1.09
RIPK4P57078 OR52E7P-201ENST00000452394 933 ntBASIC8.24□□□□□ -1.09
RIPK4P57078 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RIPK4P57078 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC8.24□□□□□ -1.09
RIPK4P57078 AC122718.2-201ENST00000505325 591 ntBASIC8.24□□□□□ -1.09
RIPK4P57078 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC8.24□□□□□ -1.09
RIPK4P57078 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC8.24□□□□□ -1.09
RIPK4P57078 AC108103.1-201ENST00000511286 446 ntBASIC8.24□□□□□ -1.09
RIPK4P57078 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC8.24□□□□□ -1.09
RIPK4P57078 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC8.24□□□□□ -1.09
RIPK4P57078 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC8.24□□□□□ -1.09
RIPK4P57078 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC8.24□□□□□ -1.09
RIPK4P57078 MIR4502-201ENST00000580432 81 ntBASIC8.24□□□□□ -1.09
RIPK4P57078 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC8.24□□□□□ -1.09
RIPK4P57078 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC8.24□□□□□ -1.09
RIPK4P57078 AC006924.1-201ENST00000610750 559 ntBASIC8.24□□□□□ -1.09
RIPK4P57078 AC022106.1-201ENST00000612834 766 ntBASIC8.24□□□□□ -1.09
RIPK4P57078 LCOR-201ENST00000286067 4542 ntBASIC8.24□□□□□ -1.09
RIPK4P57078 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
RIPK4P57078 EIF3EP1-201ENST00000433978 1316 ntBASIC8.24□□□□□ -1.09
RIPK4P57078 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIPK4P57078 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8.24□□□□□ -1.09
RIPK4P57078 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RIPK4P57078 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
RIPK4P57078 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
RIPK4P57078 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
RIPK4P57078 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.23□□□□□ -1.09
RIPK4P57078 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
RIPK4P57078 AC073365.1-203ENST00000641055 1992 ntBASIC8.23□□□□□ -1.09
RIPK4P57078 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
RIPK4P57078 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RIPK4P57078 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
RIPK4P57078 RNU1-49P-201ENST00000363468 159 ntBASIC8.23□□□□□ -1.09
RIPK4P57078 RN7SKP237-201ENST00000364663 301 ntBASIC8.23□□□□□ -1.09
RIPK4P57078 RNA5SP431-201ENST00000410312 120 ntBASIC8.23□□□□□ -1.09
RIPK4P57078 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC8.23□□□□□ -1.09
RIPK4P57078 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC8.23□□□□□ -1.09
RIPK4P57078 HMGB1P7-201ENST00000450921 612 ntBASIC8.23□□□□□ -1.09
RIPK4P57078 CTSLP6-201ENST00000458273 1002 ntBASIC8.23□□□□□ -1.09
RIPK4P57078 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC8.23□□□□□ -1.09
RIPK4P57078 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC8.23□□□□□ -1.09
RIPK4P57078 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC8.23□□□□□ -1.09
RIPK4P57078 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
RIPK4P57078 AP001858.2-201ENST00000536213 601 ntBASIC8.23□□□□□ -1.09
RIPK4P57078 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RIPK4P57078 MIR4701-201ENST00000583094 63 ntBASIC8.23□□□□□ -1.09
RIPK4P57078 AP005136.2-201ENST00000583253 1049 ntBASIC8.23□□□□□ -1.09
RIPK4P57078 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC8.23□□□□□ -1.09
RIPK4P57078 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC8.23□□□□□ -1.09
RIPK4P57078 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC8.23□□□□□ -1.09
RIPK4P57078 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC8.23□□□□□ -1.09
RIPK4P57078 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8.23□□□□□ -1.09
RIPK4P57078 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC8.23□□□□□ -1.09
RIPK4P57078 AL021877.2-201ENST00000624442 10684 ntBASIC8.23□□□□□ -1.09
RIPK4P57078 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
RIPK4P57078 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC8.23□□□□□ -1.09
RIPK4P57078 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
RIPK4P57078 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
RIPK4P57078 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RIPK4P57078 AC011815.2-201ENST00000618230 2021 ntBASIC8.22□□□□□ -1.09
RIPK4P57078 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.22□□□□□ -1.09
RIPK4P57078 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
RIPK4P57078 AC127024.8-201ENST00000623719 2094 ntBASIC8.22□□□□□ -1.09
RIPK4P57078 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
RIPK4P57078 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms