Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXA3P55318 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
FOXA3P55318 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
FOXA3P55318 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
FOXA3P55318 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
FOXA3P55318 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXA3P55318 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXA3P55318 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.67□□□□□ -1.66
FOXA3P55318 PDE4D-210ENST00000503258 2860 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
FOXA3P55318 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXA3P55318 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXA3P55318 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXA3P55318 PPBPP2-201ENST00000513150 1362 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXA3P55318 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXA3P55318 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
FOXA3P55318 AP005435.3-201ENST00000531260 3198 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXA3P55318 AP001284.1-201ENST00000528393 2118 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXA3P55318 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXA3P55318 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXA3P55318 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXA3P55318 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
FOXA3P55318 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXA3P55318 AC074375.1-201ENST00000372993 192 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXA3P55318 RNA5SP176-201ENST00000390956 110 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 NRIR-202ENST00000414795 506 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXA3P55318 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXA3P55318 AC093107.1-201ENST00000422772 609 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 AL354766.1-201ENST00000423396 542 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXA3P55318 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXA3P55318 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXA3P55318 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXA3P55318 AL731534.1-201ENST00000434711 269 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 RN7SL492P-201ENST00000460700 295 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXA3P55318 ANK3-213ENST00000486349 493 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXA3P55318 AL135933.1-201ENST00000498657 802 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXA3P55318 ST13P12-201ENST00000508958 1094 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 CASC11-203ENST00000519071 791 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXA3P55318 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXA3P55318 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXA3P55318 AP001646.2-201ENST00000528645 1156 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC4.66□□□□□ -1.66
FOXA3P55318 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXA3P55318 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXA3P55318 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC4.66□□□□□ -1.66
FOXA3P55318 MIR3689C-201ENST00000581239 72 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.66□□□□□ -1.66
FOXA3P55318 ACTG1P22-201ENST00000603793 1099 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 AL035425.4-201ENST00000624509 1063 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 MIR665-201ENST00000635949 72 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 MAPK10-350ENST00000641777 965 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 AC004076.2-201ENST00000620532 3323 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
FOXA3P55318 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXA3P55318 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
FOXA3P55318 AC009962.1-201ENST00000567327 3813 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 AL359091.1-201ENST00000449048 1734 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
FOXA3P55318 AP001541.1-201ENST00000623322 1904 ntBASIC4.66□□□□□ -1.66
FOXA3P55318 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.66□□□□□ -1.66
FOXA3P55318 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
FOXA3P55318 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
FOXA3P55318 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
FOXA3P55318 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC4.65□□□□□ -1.66
FOXA3P55318 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
FOXA3P55318 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
FOXA3P55318 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.65□□□□□ -1.66
FOXA3P55318 AC093671.1-201ENST00000624981 2929 ntBASIC4.65□□□□□ -1.66
FOXA3P55318 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
FOXA3P55318 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXA3P55318 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXA3P55318 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXA3P55318 RN7SKP189-201ENST00000365042 330 ntBASIC4.65□□□□□ -1.67
FOXA3P55318 U3.14-201ENST00000365363 227 ntBASIC4.65□□□□□ -1.67
FOXA3P55318 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
FOXA3P55318 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
FOXA3P55318 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
FOXA3P55318 PCNAP3-201ENST00000397222 778 ntBASIC4.65□□□□□ -1.67
FOXA3P55318 SNX18P13-201ENST00000412442 529 ntBASIC4.65□□□□□ -1.67
FOXA3P55318 SMARCE1P1-201ENST00000417747 1186 ntBASIC4.65□□□□□ -1.67
FOXA3P55318 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC4.65□□□□□ -1.67
FOXA3P55318 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXA3P55318 REREP1Y-201ENST00000422655 198 ntBASIC4.65□□□□□ -1.67
FOXA3P55318 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXA3P55318 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC4.65□□□□□ -1.67
FOXA3P55318 BX276092.6-201ENST00000430476 250 ntBASIC4.65□□□□□ -1.67
FOXA3P55318 MED28P4-201ENST00000433137 572 ntBASIC4.65□□□□□ -1.67
FOXA3P55318 NIP7P1-201ENST00000433227 512 ntBASIC4.65□□□□□ -1.67
FOXA3P55318 SUMO2P8-201ENST00000434672 286 ntBASIC4.65□□□□□ -1.67
FOXA3P55318 RPS3AP38-201ENST00000435889 763 ntBASIC4.65□□□□□ -1.67
FOXA3P55318 AC013403.1-201ENST00000436954 263 ntBASIC4.65□□□□□ -1.67
FOXA3P55318 REREP2Y-201ENST00000439103 200 ntBASIC4.65□□□□□ -1.67
FOXA3P55318 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms