Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ARMC4P1-201ENST00000438905 707 ntBASIC6.12□□□□□ -1.43
SLC6A12P48065 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.12□□□□□ -1.43
SLC6A12P48065 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.12□□□□□ -1.43
SLC6A12P48065 RN7SL836P-201ENST00000476140 296 ntBASIC6.12□□□□□ -1.43
SLC6A12P48065 RN7SL369P-201ENST00000477138 299 ntBASIC6.12□□□□□ -1.43
SLC6A12P48065 AC010343.2-201ENST00000510162 224 ntBASIC6.12□□□□□ -1.43
SLC6A12P48065 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.12□□□□□ -1.43
SLC6A12P48065 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A12P48065 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A12P48065 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.12□□□□□ -1.43
SLC6A12P48065 AC135983.3-201ENST00000528049 1226 ntBASIC6.12□□□□□ -1.43
SLC6A12P48065 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.12□□□□□ -1.43
SLC6A12P48065 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.12□□□□□ -1.43
SLC6A12P48065 DPPA3P2-201ENST00000553589 478 ntBASIC6.12□□□□□ -1.43
SLC6A12P48065 WBP11P1-201ENST00000562560 1931 ntBASIC6.12□□□□□ -1.43
SLC6A12P48065 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.12□□□□□ -1.43
SLC6A12P48065 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.12□□□□□ -1.43
SLC6A12P48065 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.12□□□□□ -1.43
SLC6A12P48065 AC027229.1-201ENST00000583887 253 ntBASIC6.12□□□□□ -1.43
SLC6A12P48065 AC107993.1-201ENST00000591343 684 ntBASIC6.12□□□□□ -1.43
SLC6A12P48065 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.12□□□□□ -1.43
SLC6A12P48065 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.12□□□□□ -1.43
SLC6A12P48065 AL021368.3-201ENST00000607119 578 ntBASIC6.12□□□□□ -1.43
SLC6A12P48065 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A12P48065 MIR6813-201ENST00000621638 56 ntBASIC6.12□□□□□ -1.43
SLC6A12P48065 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.12□□□□□ -1.43
SLC6A12P48065 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SLC6A12P48065 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
SLC6A12P48065 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.12□□□□□ -1.43
SLC6A12P48065 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.12□□□□□ -1.43
SLC6A12P48065 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC6A12P48065 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC6A12P48065 AOX3P-204ENST00000491025 2107 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 AC090220.1-201ENST00000593078 1699 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC6A12P48065 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC6A12P48065 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC6.11□□□□□ -1.43
SLC6A12P48065 LCN1P2-201ENST00000372030 223 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 MIR433-201ENST00000384837 93 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 AL445238.1-204ENST00000400311 463 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC6A12P48065 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.11□□□□□ -1.43
SLC6A12P48065 Z82198.3-201ENST00000421145 199 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.11□□□□□ -1.43
SLC6A12P48065 GAPDHP19-201ENST00000431768 1005 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.11□□□□□ -1.43
SLC6A12P48065 RPEP4-201ENST00000437636 602 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 EMC3-AS1-205ENST00000438698 534 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 COX4I1P2-201ENST00000447446 547 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 VPS25P1-201ENST00000455691 508 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.11□□□□□ -1.43
SLC6A12P48065 RPL12P31-201ENST00000478433 450 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 GM2AP2-201ENST00000491764 562 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.11□□□□□ -1.43
SLC6A12P48065 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC6A12P48065 AC124891.1-201ENST00000536322 519 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 TDGP1-201ENST00000543961 1229 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.11□□□□□ -1.43
SLC6A12P48065 MIR212-201ENST00000586026 110 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.11□□□□□ -1.43
SLC6A12P48065 AL589765.6-201ENST00000601909 549 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 AC006924.1-201ENST00000610750 559 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.11□□□□□ -1.43
SLC6A12P48065 AL357153.4-201ENST00000620487 1016 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 AP003072.5-201ENST00000623872 773 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.11□□□□□ -1.43
SLC6A12P48065 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.11□□□□□ -1.43
SLC6A12P48065 OR7E91P-202ENST00000642062 1198 ntBASIC6.11□□□□□ -1.43
SLC6A12P48065 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.11□□□□□ -1.43
SLC6A12P48065 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.11□□□□□ -1.43
SLC6A12P48065 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC6A12P48065 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SLC6A12P48065 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SLC6A12P48065 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC6A12P48065 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC6A12P48065 AL132656.3-201ENST00000606384 1595 ntBASIC6.1□□□□□ -1.43
SLC6A12P48065 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SLC6A12P48065 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC6A12P48065 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.1□□□□□ -1.43
SLC6A12P48065 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.1□□□□□ -1.43
SLC6A12P48065 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC6A12P48065 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.1□□□□□ -1.43
SLC6A12P48065 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC6A12P48065 AC003045.1-201ENST00000398779 713 ntBASIC6.1□□□□□ -1.43
SLC6A12P48065 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.1□□□□□ -1.43
SLC6A12P48065 RNA5SP251-201ENST00000410614 137 ntBASIC6.1□□□□□ -1.43
SLC6A12P48065 HMGA1P8-201ENST00000414130 321 ntBASIC6.1□□□□□ -1.43
SLC6A12P48065 AL360013.1-201ENST00000419031 858 ntBASIC6.1□□□□□ -1.43
SLC6A12P48065 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.1□□□□□ -1.43
SLC6A12P48065 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC6A12P48065 RPS7P14-201ENST00000426405 583 ntBASIC6.1□□□□□ -1.43
SLC6A12P48065 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.1□□□□□ -1.43
SLC6A12P48065 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.1□□□□□ -1.43
SLC6A12P48065 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SLC6A12P48065 OR2L9P-201ENST00000444456 913 ntBASIC6.1□□□□□ -1.43
SLC6A12P48065 MORF4-201ENST00000447135 971 ntBASIC6.1□□□□□ -1.43
SLC6A12P48065 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.1□□□□□ -1.43
SLC6A12P48065 AL022319.1-201ENST00000458183 1167 ntBASIC6.1□□□□□ -1.43
SLC6A12P48065 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SLC6A12P48065 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms