Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.85□□□□□ -1.31
MTHFRP42898 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
MTHFRP42898 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MTHFRP42898 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.84□□□□□ -1.31
MTHFRP42898 AC074141.1-201ENST00000588129 2995 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
MTHFRP42898 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.84□□□□□ -1.31
MTHFRP42898 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
MTHFRP42898 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.84□□□□□ -1.31
MTHFRP42898 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MTHFRP42898 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MTHFRP42898 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
MTHFRP42898 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.84□□□□□ -1.31
MTHFRP42898 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MTHFRP42898 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.84□□□□□ -1.31
MTHFRP42898 AC104837.1-201ENST00000444644 1587 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
MTHFRP42898 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.84□□□□□ -1.31
MTHFRP42898 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MTHFRP42898 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
MTHFRP42898 RNA5SP65-201ENST00000363166 119 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 SNORA51.1-201ENST00000363243 140 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
MTHFRP42898 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
MTHFRP42898 AL512422.1-201ENST00000407033 553 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 RN7SKP232-201ENST00000410170 290 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 RPS3P2-201ENST00000421346 701 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MTHFRP42898 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.84□□□□□ -1.31
MTHFRP42898 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 AC097463.1-201ENST00000447288 481 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 AC002075.1-201ENST00000457396 676 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 RN7SL101P-201ENST00000496350 279 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.84□□□□□ -1.31
MTHFRP42898 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.84□□□□□ -1.31
MTHFRP42898 AC010463.3-201ENST00000594077 500 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 AC119501.1-201ENST00000603646 475 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.84□□□□□ -1.31
MTHFRP42898 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
MTHFRP42898 AC024884.1-201ENST00000620583 399 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 LINC02495-203ENST00000636704 242 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MTHFRP42898 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MTHFRP42898 MTCO1P46-201ENST00000451639 1491 ntBASIC6.84□□□□□ -1.31
MTHFRP42898 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MTHFRP42898 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
MTHFRP42898 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.84□□□□□ -1.32
MTHFRP42898 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.84□□□□□ -1.32
MTHFRP42898 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
MTHFRP42898 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
MTHFRP42898 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MTHFRP42898 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.83□□□□□ -1.32
MTHFRP42898 RACGAP1P-201ENST00000550663 1879 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.83□□□□□ -1.32
MTHFRP42898 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
MTHFRP42898 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MTHFRP42898 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
MTHFRP42898 HCFC2P1-201ENST00000392864 1592 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 RPL31P11-201ENST00000426558 1558 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MTHFRP42898 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MTHFRP42898 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.83□□□□□ -1.32
MTHFRP42898 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MTHFRP42898 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.83□□□□□ -1.32
MTHFRP42898 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MTHFRP42898 RNA5SP510-201ENST00000364697 99 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 RN7SKP69-201ENST00000365390 305 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 DHFRP2-201ENST00000414224 547 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.83□□□□□ -1.32
MTHFRP42898 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
MTHFRP42898 AL121578.1-201ENST00000428051 892 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 IGLV3-4-201ENST00000432300 244 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.83□□□□□ -1.32
MTHFRP42898 CRYGGP-201ENST00000443337 145 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.83□□□□□ -1.32
MTHFRP42898 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
MTHFRP42898 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.83□□□□□ -1.32
MTHFRP42898 AC093719.1-201ENST00000480427 441 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 RPL12P30-201ENST00000488389 499 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 RPS10P20-201ENST00000494130 463 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 SNX18P24-201ENST00000505249 671 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 AC111000.5-201ENST00000506559 1178 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 AC096754.1-201ENST00000508904 818 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MTHFRP42898 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MTHFRP42898 AC092266.1-201ENST00000610958 165 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 AL357153.4-201ENST00000620487 1016 ntBASIC6.83□□□□□ -1.32
MTHFRP42898 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.83□□□□□ -1.32
MTHFRP42898 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.83□□□□□ -1.32
MTHFRP42898 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.83□□□□□ -1.32
MTHFRP42898 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MTHFRP42898 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.83□□□□□ -1.32
MTHFRP42898 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
MTHFRP42898 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.83□□□□□ -1.32
MTHFRP42898 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
MTHFRP42898 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.83□□□□□ -1.32
MTHFRP42898 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
MTHFRP42898 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
MTHFRP42898 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms