Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.18□□□□□ -1.26
CIITAP33076 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.18□□□□□ -1.26
CIITAP33076 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CIITAP33076 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CIITAP33076 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CIITAP33076 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CIITAP33076 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.18□□□□□ -1.26
CIITAP33076 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CIITAP33076 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CIITAP33076 MTCO1P46-201ENST00000451639 1491 ntBASIC7.17□□□□□ -1.26
CIITAP33076 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CIITAP33076 CASC19-243ENST00000641588 1546 ntBASIC7.17□□□□□ -1.26
CIITAP33076 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.17□□□□□ -1.26
CIITAP33076 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CIITAP33076 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
CIITAP33076 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CIITAP33076 YWHAZP6-201ENST00000399764 738 ntBASIC7.17□□□□□ -1.26
CIITAP33076 RN7SKP108-201ENST00000411367 328 ntBASIC7.17□□□□□ -1.26
CIITAP33076 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.17□□□□□ -1.26
CIITAP33076 AL139158.1-201ENST00000424719 340 ntBASIC7.17□□□□□ -1.26
CIITAP33076 RBMY2AP-201ENST00000445405 1157 ntBASIC7.17□□□□□ -1.26
CIITAP33076 MORF4-201ENST00000447135 971 ntBASIC7.17□□□□□ -1.26
CIITAP33076 RBMY2CP-201ENST00000448575 1157 ntBASIC7.17□□□□□ -1.26
CIITAP33076 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.17□□□□□ -1.26
CIITAP33076 RBMY2DP-202ENST00000448881 1157 ntBASIC7.17□□□□□ -1.26
CIITAP33076 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.17□□□□□ -1.26
CIITAP33076 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.17□□□□□ -1.26
CIITAP33076 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC7.17□□□□□ -1.26
CIITAP33076 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.17□□□□□ -1.26
CIITAP33076 AC005017.1-201ENST00000482002 490 ntBASIC7.17□□□□□ -1.26
CIITAP33076 AC010343.2-201ENST00000510162 224 ntBASIC7.17□□□□□ -1.26
CIITAP33076 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CIITAP33076 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.17□□□□□ -1.26
CIITAP33076 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.17□□□□□ -1.26
CIITAP33076 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.17□□□□□ -1.26
CIITAP33076 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.17□□□□□ -1.26
CIITAP33076 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC7.17□□□□□ -1.26
CIITAP33076 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.17□□□□□ -1.26
CIITAP33076 SMIM12P1-201ENST00000603004 274 ntBASIC7.17□□□□□ -1.26
CIITAP33076 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.17□□□□□ -1.26
CIITAP33076 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.17□□□□□ -1.26
CIITAP33076 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CIITAP33076 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CIITAP33076 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
CIITAP33076 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
CIITAP33076 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CIITAP33076 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CIITAP33076 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.17□□□□□ -1.26
CIITAP33076 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CIITAP33076 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
CIITAP33076 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CIITAP33076 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.17□□□□□ -1.26
CIITAP33076 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.17□□□□□ -1.26
CIITAP33076 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CIITAP33076 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CIITAP33076 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CIITAP33076 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CIITAP33076 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.16□□□□□ -1.26
CIITAP33076 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.16□□□□□ -1.26
CIITAP33076 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.16□□□□□ -1.26
CIITAP33076 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.16□□□□□ -1.26
CIITAP33076 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
CIITAP33076 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CIITAP33076 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CIITAP33076 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CIITAP33076 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CIITAP33076 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.16□□□□□ -1.26
CIITAP33076 CYP4F30P-202ENST00000420048 405 ntBASIC7.16□□□□□ -1.26
CIITAP33076 RPSAP65-201ENST00000429660 595 ntBASIC7.16□□□□□ -1.26
CIITAP33076 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CIITAP33076 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CIITAP33076 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.16□□□□□ -1.26
CIITAP33076 AC112484.3-201ENST00000505910 329 ntBASIC7.16□□□□□ -1.26
CIITAP33076 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CIITAP33076 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC7.16□□□□□ -1.26
CIITAP33076 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.16□□□□□ -1.26
CIITAP33076 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.16□□□□□ -1.26
CIITAP33076 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.16□□□□□ -1.26
CIITAP33076 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.16□□□□□ -1.26
CIITAP33076 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC7.16□□□□□ -1.26
CIITAP33076 AC107958.1-201ENST00000556576 290 ntBASIC7.16□□□□□ -1.26
CIITAP33076 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.16□□□□□ -1.26
CIITAP33076 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.16□□□□□ -1.26
CIITAP33076 AC009120.3-201ENST00000563335 499 ntBASIC7.16□□□□□ -1.26
CIITAP33076 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.16□□□□□ -1.26
CIITAP33076 MIR4701-201ENST00000583094 63 ntBASIC7.16□□□□□ -1.26
CIITAP33076 AL513218.1-201ENST00000606527 391 ntBASIC7.16□□□□□ -1.26
CIITAP33076 AC010998.3-201ENST00000613871 631 ntBASIC7.16□□□□□ -1.26
CIITAP33076 AC020658.4-201ENST00000613987 684 ntBASIC7.16□□□□□ -1.26
CIITAP33076 AC024255.1-201ENST00000614376 102 ntBASIC7.16□□□□□ -1.26
CIITAP33076 MIR6721-201ENST00000617181 87 ntBASIC7.16□□□□□ -1.26
CIITAP33076 MIR7159-201ENST00000620587 66 ntBASIC7.16□□□□□ -1.26
CIITAP33076 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CIITAP33076 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CIITAP33076 PABPC1P8-201ENST00000452851 2086 ntBASIC7.16□□□□□ -1.26
CIITAP33076 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CIITAP33076 CDY10P-201ENST00000452415 1567 ntBASIC7.16□□□□□ -1.26
CIITAP33076 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CIITAP33076 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
CIITAP33076 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms