Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC8.79□□□□□ -1
CPS1P31327 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC8.79□□□□□ -1
CPS1P31327 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.79□□□□□ -1
CPS1P31327 AC009237.1-201ENST00000442127 744 ntBASIC8.79□□□□□ -1
CPS1P31327 RNA5SP92-201ENST00000516437 110 ntBASIC8.79□□□□□ -1
CPS1P31327 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC8.79□□□□□ -1
CPS1P31327 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC8.79□□□□□ -1
CPS1P31327 AC021269.1-201ENST00000526860 705 ntBASIC8.79□□□□□ -1
CPS1P31327 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC8.79□□□□□ -1
CPS1P31327 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC8.79□□□□□ -1
CPS1P31327 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC8.79□□□□□ -1
CPS1P31327 MIR4505-201ENST00000582238 73 ntBASIC8.79□□□□□ -1
CPS1P31327 ELOCP28-201ENST00000590044 317 ntBASIC8.79□□□□□ -1
CPS1P31327 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC8.79□□□□□ -1
CPS1P31327 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CPS1P31327 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.79□□□□□ -1
CPS1P31327 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.79□□□□□ -1
CPS1P31327 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
CPS1P31327 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC8.78□□□□□ -1
CPS1P31327 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CPS1P31327 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CPS1P31327 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.78□□□□□ -1
CPS1P31327 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8.78□□□□□ -1
CPS1P31327 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
CPS1P31327 CLCA3P-203ENST00000490028 2781 ntBASIC8.78□□□□□ -1
CPS1P31327 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
CPS1P31327 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.78□□□□□ -1
CPS1P31327 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
CPS1P31327 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CPS1P31327 RN7SKP124-201ENST00000364730 341 ntBASIC8.78□□□□□ -1
CPS1P31327 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC8.78□□□□□ -1
CPS1P31327 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC8.78□□□□□ -1
CPS1P31327 SEPT14P12-201ENST00000442280 560 ntBASIC8.78□□□□□ -1
CPS1P31327 NENFP3-201ENST00000503735 313 ntBASIC8.78□□□□□ -1
CPS1P31327 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC8.78□□□□□ -1
CPS1P31327 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC8.78□□□□□ -1
CPS1P31327 ASB8-215ENST00000540782 659 ntTSL 3 BASIC8.78□□□□□ -1
CPS1P31327 CLMN-206ENST00000556441 452 ntTSL 5 BASIC8.78□□□□□ -1
CPS1P31327 AC015802.2-201ENST00000589690 189 ntBASIC8.78□□□□□ -1
CPS1P31327 HOTTIP_3.1-201ENST00000619957 337 ntBASIC8.78□□□□□ -1
CPS1P31327 MFSD4BP1-201ENST00000513330 1552 ntBASIC8.78□□□□□ -1
CPS1P31327 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.78□□□□□ -1
CPS1P31327 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CPS1P31327 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC8.78□□□□□ -1
CPS1P31327 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
CPS1P31327 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.78□□□□□ -1
CPS1P31327 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC8.78□□□□□ -1
CPS1P31327 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
CPS1P31327 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CPS1P31327 AC062029.1-202ENST00000606164 3651 ntBASIC8.77□□□□□ -1
CPS1P31327 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
CPS1P31327 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CPS1P31327 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC8.77□□□□□ -1.01
CPS1P31327 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC8.77□□□□□ -1.01
CPS1P31327 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC8.77□□□□□ -1.01
CPS1P31327 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.77□□□□□ -1.01
CPS1P31327 AL672167.3-201ENST00000465951 960 ntBASIC8.77□□□□□ -1.01
CPS1P31327 WBP1LP3-201ENST00000523033 208 ntBASIC8.77□□□□□ -1.01
CPS1P31327 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC8.77□□□□□ -1.01
CPS1P31327 AC009120.3-201ENST00000563335 499 ntBASIC8.77□□□□□ -1.01
CPS1P31327 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC8.77□□□□□ -1.01
CPS1P31327 MIR4776-2-201ENST00000580204 80 ntBASIC8.77□□□□□ -1.01
CPS1P31327 AC027229.1-201ENST00000583887 253 ntBASIC8.77□□□□□ -1.01
CPS1P31327 AC105105.5-201ENST00000622635 1294 ntBASIC8.77□□□□□ -1.01
CPS1P31327 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CPS1P31327 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CPS1P31327 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
CPS1P31327 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CPS1P31327 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CPS1P31327 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CPS1P31327 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC8.77□□□□□ -1.01
CPS1P31327 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CPS1P31327 AC005332.9-201ENST00000620266 2921 ntBASIC8.76□□□□□ -1.01
CPS1P31327 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
CPS1P31327 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC8.76□□□□□ -1.01
CPS1P31327 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
CPS1P31327 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
CPS1P31327 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC8.76□□□□□ -1.01
CPS1P31327 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
CPS1P31327 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
CPS1P31327 AL596448.1-201ENST00000415024 392 ntBASIC8.76□□□□□ -1.01
CPS1P31327 RBMY2KP-201ENST00000418221 992 ntBASIC8.76□□□□□ -1.01
CPS1P31327 AL139156.3-201ENST00000454802 394 ntBASIC8.76□□□□□ -1.01
CPS1P31327 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC8.76□□□□□ -1.01
CPS1P31327 AC008953.1-201ENST00000497334 318 ntBASIC8.76□□□□□ -1.01
CPS1P31327 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC8.76□□□□□ -1.01
CPS1P31327 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CPS1P31327 AC106800.3-201ENST00000511389 308 ntBASIC8.76□□□□□ -1.01
CPS1P31327 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC8.76□□□□□ -1.01
CPS1P31327 AL356801.1-201ENST00000559320 294 ntBASIC8.76□□□□□ -1.01
CPS1P31327 AC074050.1-201ENST00000563247 211 ntBASIC8.76□□□□□ -1.01
CPS1P31327 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC8.76□□□□□ -1.01
CPS1P31327 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC8.76□□□□□ -1.01
CPS1P31327 AC022106.1-201ENST00000612834 766 ntBASIC8.76□□□□□ -1.01
CPS1P31327 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.76□□□□□ -1.01
CPS1P31327 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CPS1P31327 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CPS1P31327 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
CPS1P31327 AL136981.1-203ENST00000451452 3844 ntBASIC8.76□□□□□ -1.01
CPS1P31327 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms