Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC6.72□□□□□ -1.33
HOXC12P31275 MTCO1P56-201ENST00000401674 224 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 AL139806.1-201ENST00000403057 1002 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 AL590143.1-201ENST00000405071 138 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 NACAP7-201ENST00000407371 609 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXC12P31275 BCRP8-201ENST00000412037 255 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 PTP4A1P5-201ENST00000420305 455 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 RPSAP1-201ENST00000421328 880 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXC12P31275 AC019055.1-201ENST00000432822 443 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXC12P31275 AL035458.1-201ENST00000433096 585 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 NIP7P1-201ENST00000433227 512 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXC12P31275 AL512882.1-201ENST00000436086 832 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXC12P31275 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
HOXC12P31275 AC023512.1-201ENST00000444513 499 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXC12P31275 MTND6P5-201ENST00000448266 512 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXC12P31275 MRPL35P4-201ENST00000453682 566 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXC12P31275 RPS20P4-201ENST00000461659 355 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 RN7SL791P-201ENST00000467868 295 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 RN7SL861P-201ENST00000473793 285 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 RPL23AP44-201ENST00000482216 473 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 AC107398.1-201ENST00000486904 505 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXC12P31275 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXC12P31275 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXC12P31275 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.72□□□□□ -1.33
HOXC12P31275 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXC12P31275 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC6.72□□□□□ -1.33
HOXC12P31275 MTND4P2-201ENST00000507767 1203 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 LINC01085-203ENST00000511195 326 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXC12P31275 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.72□□□□□ -1.33
HOXC12P31275 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC12P31275 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
HOXC12P31275 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXC12P31275 DCN-207ENST00000546370 586 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXC12P31275 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXC12P31275 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
HOXC12P31275 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXC12P31275 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXC12P31275 AC040162.2-201ENST00000573092 157 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 RN7SL131P-201ENST00000579043 256 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 AC068020.1-201ENST00000594215 661 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 ANKRD20A19P-203ENST00000602724 295 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.72□□□□□ -1.33
HOXC12P31275 AC130352.1-201ENST00000602979 661 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 AC013562.2-201ENST00000611632 603 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXC12P31275 AL121890.3-201ENST00000618494 516 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXC12P31275 AC015660.5-201ENST00000623238 564 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 AC067852.7-201ENST00000623270 535 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 AC016582.1-202ENST00000636341 2982 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXC12P31275 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXC12P31275 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC6.72□□□□□ -1.33
HOXC12P31275 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HOXC12P31275 ARHGAP42P4-201ENST00000549782 2934 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXC12P31275 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC12P31275 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXC12P31275 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC12P31275 ELL2P3-201ENST00000457883 1602 ntBASIC6.72□□□□□ -1.33
HOXC12P31275 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC12P31275 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC12P31275 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC12P31275 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXC12P31275 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC12P31275 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC12P31275 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC12P31275 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HOXC12P31275 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.72□□□□□ -1.33
HOXC12P31275 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.71□□□□□ -1.33
HOXC12P31275 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
HOXC12P31275 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
HOXC12P31275 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
HOXC12P31275 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC6.71□□□□□ -1.33
HOXC12P31275 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
HOXC12P31275 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC12P31275 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC6.71□□□□□ -1.34
HOXC12P31275 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC12P31275 AC036108.4-201ENST00000611654 2516 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC12P31275 MTCO1P18-201ENST00000455518 1419 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
HOXC12P31275 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
HOXC12P31275 SNORD113-6-201ENST00000363345 75 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 RNA5SP79-201ENST00000365193 109 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 SNORD15A-201ENST00000384214 148 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 MIR138-2-201ENST00000384916 84 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 HMGB3P1-201ENST00000393368 573 ntBASIC6.71□□□□□ -1.34
HOXC12P31275 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
HOXC12P31275 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.71□□□□□ -1.34
HOXC12P31275 OR7E36P-201ENST00000419933 954 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms