Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC8.36□□□□□ -1.07
RFX1P22670 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.36□□□□□ -1.07
RFX1P22670 RPL30P6-201ENST00000475925 342 ntBASIC8.36□□□□□ -1.07
RFX1P22670 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC8.36□□□□□ -1.07
RFX1P22670 FTH1P23-201ENST00000492727 550 ntBASIC8.36□□□□□ -1.07
RFX1P22670 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC8.36□□□□□ -1.07
RFX1P22670 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.36□□□□□ -1.07
RFX1P22670 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC8.36□□□□□ -1.07
RFX1P22670 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC8.36□□□□□ -1.07
RFX1P22670 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC8.36□□□□□ -1.07
RFX1P22670 IGHVII-49-1-201ENST00000521760 224 ntBASIC8.36□□□□□ -1.07
RFX1P22670 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RFX1P22670 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
RFX1P22670 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC8.36□□□□□ -1.07
RFX1P22670 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC8.36□□□□□ -1.07
RFX1P22670 AP000619.3-201ENST00000535634 1127 ntBASIC8.36□□□□□ -1.07
RFX1P22670 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC8.36□□□□□ -1.07
RFX1P22670 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC8.36□□□□□ -1.07
RFX1P22670 TTN-AS1-210ENST00000578746 677 ntTSL 3 BASIC8.36□□□□□ -1.07
RFX1P22670 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC8.36□□□□□ -1.07
RFX1P22670 AC096553.1-201ENST00000605169 829 ntBASIC8.36□□□□□ -1.07
RFX1P22670 RN7SKP299-201ENST00000606679 301 ntBASIC8.36□□□□□ -1.07
RFX1P22670 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.36□□□□□ -1.07
RFX1P22670 AL592148.2-201ENST00000612210 372 ntBASIC8.36□□□□□ -1.07
RFX1P22670 PTCHD3P1-201ENST00000612350 537 ntBASIC8.36□□□□□ -1.07
RFX1P22670 AC011815.3-201ENST00000624194 473 ntBASIC8.36□□□□□ -1.07
RFX1P22670 RPL36AP21-202ENST00000639134 430 ntBASIC8.36□□□□□ -1.07
RFX1P22670 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
RFX1P22670 AL139254.2-202ENST00000641937 1156 ntBASIC8.36□□□□□ -1.07
RFX1P22670 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.36□□□□□ -1.07
RFX1P22670 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RFX1P22670 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
RFX1P22670 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RFX1P22670 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RFX1P22670 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RFX1P22670 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC8.36□□□□□ -1.07
RFX1P22670 AC027279.4-201ENST00000624371 2072 ntBASIC8.36□□□□□ -1.07
RFX1P22670 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
RFX1P22670 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC8.36□□□□□ -1.07
RFX1P22670 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
RFX1P22670 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RFX1P22670 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
RFX1P22670 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.35□□□□□ -1.07
RFX1P22670 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC8.35□□□□□ -1.07
RFX1P22670 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RFX1P22670 NF1P7-201ENST00000612076 1530 ntBASIC8.35□□□□□ -1.07
RFX1P22670 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RFX1P22670 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RFX1P22670 AC093297.3-201ENST00000607056 2517 ntBASIC8.35□□□□□ -1.07
RFX1P22670 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC8.35□□□□□ -1.07
RFX1P22670 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RFX1P22670 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
RFX1P22670 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RFX1P22670 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
RFX1P22670 RN7SKP50-201ENST00000364694 315 ntBASIC8.35□□□□□ -1.07
RFX1P22670 SRI-202ENST00000394641 653 ntTSL 2 BASIC8.35□□□□□ -1.07
RFX1P22670 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RFX1P22670 AC092042.2-201ENST00000417304 331 ntBASIC8.35□□□□□ -1.07
RFX1P22670 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC8.35□□□□□ -1.07
RFX1P22670 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RFX1P22670 PPIL1P1-201ENST00000423936 499 ntBASIC8.35□□□□□ -1.07
RFX1P22670 OR5AW1P-201ENST00000426334 1006 ntBASIC8.35□□□□□ -1.07
RFX1P22670 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.35□□□□□ -1.07
RFX1P22670 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC8.35□□□□□ -1.07
RFX1P22670 GAPDHP32-201ENST00000433816 998 ntBASIC8.35□□□□□ -1.07
RFX1P22670 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC8.35□□□□□ -1.07
RFX1P22670 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC8.35□□□□□ -1.07
RFX1P22670 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC8.35□□□□□ -1.07
RFX1P22670 CALM1P2-201ENST00000452941 448 ntBASIC8.35□□□□□ -1.07
RFX1P22670 RN7SL308P-201ENST00000464971 297 ntBASIC8.35□□□□□ -1.07
RFX1P22670 RN7SL228P-201ENST00000470060 303 ntBASIC8.35□□□□□ -1.07
RFX1P22670 OR11I1P-201ENST00000486033 954 ntBASIC8.35□□□□□ -1.07
RFX1P22670 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC8.35□□□□□ -1.07
RFX1P22670 MTATP6P1-201ENST00000514057 681 ntBASIC8.35□□□□□ -1.07
RFX1P22670 AF279873.3-204ENST00000523336 784 ntTSL 2 BASIC8.35□□□□□ -1.07
RFX1P22670 ZDHHC20P3-201ENST00000531576 336 ntBASIC8.35□□□□□ -1.07
RFX1P22670 THAP2-202ENST00000547843 672 ntTSL 2 BASIC8.35□□□□□ -1.07
RFX1P22670 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.35□□□□□ -1.07
RFX1P22670 NOP10-202ENST00000557912 436 ntTSL 2 BASIC8.35□□□□□ -1.07
RFX1P22670 AC091304.4-201ENST00000565703 620 ntBASIC8.35□□□□□ -1.07
RFX1P22670 FAM106CP-201ENST00000582212 507 ntBASIC8.35□□□□□ -1.07
RFX1P22670 MIR4999-201ENST00000585029 91 ntBASIC8.35□□□□□ -1.07
RFX1P22670 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC8.35□□□□□ -1.07
RFX1P22670 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC8.35□□□□□ -1.07
RFX1P22670 AL035417.2-201ENST00000603887 796 ntBASIC8.35□□□□□ -1.07
RFX1P22670 AC092653.1-201ENST00000608509 531 ntBASIC8.35□□□□□ -1.07
RFX1P22670 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.35□□□□□ -1.07
RFX1P22670 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC8.35□□□□□ -1.07
RFX1P22670 MFSD8-245ENST00000641743 948 ntBASIC8.35□□□□□ -1.07
RFX1P22670 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
RFX1P22670 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
RFX1P22670 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
RFX1P22670 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RFX1P22670 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC8.35□□□□□ -1.07
RFX1P22670 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC8.35□□□□□ -1.07
RFX1P22670 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC8.35□□□□□ -1.07
RFX1P22670 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC8.35□□□□□ -1.07
RFX1P22670 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RFX1P22670 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RFX1P22670 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms