Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL139415.1-201ENST00000424862 352 ntBASIC10.42□□□□□ -0.74
CFTRP13569 AL445928.1-201ENST00000435545 222 ntBASIC10.42□□□□□ -0.74
CFTRP13569 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC10.42□□□□□ -0.74
CFTRP13569 EIF4A2P5-201ENST00000529914 499 ntBASIC10.42□□□□□ -0.74
CFTRP13569 LAPTM4BP2-201ENST00000604542 446 ntBASIC10.42□□□□□ -0.74
CFTRP13569 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CFTRP13569 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CFTRP13569 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC10.42□□□□□ -0.74
CFTRP13569 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC10.42□□□□□ -0.74
CFTRP13569 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
CFTRP13569 AC020978.8-201ENST00000571975 3022 ntBASIC10.42□□□□□ -0.74
CFTRP13569 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC10.42□□□□□ -0.74
CFTRP13569 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC10.42□□□□□ -0.74
CFTRP13569 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
CFTRP13569 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
CFTRP13569 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
CFTRP13569 RN7SKP59-201ENST00000410520 314 ntBASIC10.42□□□□□ -0.74
CFTRP13569 OR2AT2P-201ENST00000413438 905 ntBASIC10.42□□□□□ -0.74
CFTRP13569 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC10.42□□□□□ -0.74
CFTRP13569 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC10.42□□□□□ -0.74
CFTRP13569 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC10.42□□□□□ -0.74
CFTRP13569 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC10.42□□□□□ -0.74
CFTRP13569 AC092967.1-201ENST00000449016 481 ntBASIC10.42□□□□□ -0.74
CFTRP13569 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC10.42□□□□□ -0.74
CFTRP13569 AC095057.1-201ENST00000507583 168 ntBASIC10.42□□□□□ -0.74
CFTRP13569 NDUFB5P1-201ENST00000508134 564 ntBASIC10.42□□□□□ -0.74
CFTRP13569 AC092593.2-201ENST00000513866 913 ntBASIC10.42□□□□□ -0.74
CFTRP13569 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC10.42□□□□□ -0.74
CFTRP13569 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC10.42□□□□□ -0.74
CFTRP13569 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
CFTRP13569 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CFTRP13569 AC117409.1-201ENST00000470499 1310 ntBASIC10.41□□□□□ -0.74
CFTRP13569 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CFTRP13569 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CFTRP13569 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
CFTRP13569 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
CFTRP13569 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CFTRP13569 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CFTRP13569 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC10.41□□□□□ -0.74
CFTRP13569 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC10.41□□□□□ -0.74
CFTRP13569 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC10.41□□□□□ -0.74
CFTRP13569 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
CFTRP13569 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
CFTRP13569 AL645927.1-201ENST00000396783 406 ntBASIC10.41□□□□□ -0.74
CFTRP13569 AP000534.2-201ENST00000412729 568 ntBASIC10.41□□□□□ -0.74
CFTRP13569 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC10.41□□□□□ -0.74
CFTRP13569 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CFTRP13569 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC10.41□□□□□ -0.74
CFTRP13569 OR5M14P-201ENST00000506803 618 ntBASIC10.41□□□□□ -0.74
CFTRP13569 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC10.41□□□□□ -0.74
CFTRP13569 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC10.41□□□□□ -0.74
CFTRP13569 MIR6748-201ENST00000610433 71 ntBASIC10.41□□□□□ -0.74
CFTRP13569 AC068870.2-201ENST00000620635 389 ntBASIC10.41□□□□□ -0.74
CFTRP13569 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
CFTRP13569 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC10.41□□□□□ -0.74
CFTRP13569 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
CFTRP13569 LINC02019-201ENST00000608605 2060 ntBASIC10.41□□□□□ -0.74
CFTRP13569 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CFTRP13569 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
CFTRP13569 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
CFTRP13569 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CFTRP13569 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC10.4□□□□□ -0.74
CFTRP13569 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC10.4□□□□□ -0.74
CFTRP13569 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
CFTRP13569 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
CFTRP13569 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC10.4□□□□□ -0.74
CFTRP13569 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC10.4□□□□□ -0.74
CFTRP13569 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CFTRP13569 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CFTRP13569 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC10.4□□□□□ -0.74
CFTRP13569 CYP4F30P-202ENST00000420048 405 ntBASIC10.4□□□□□ -0.74
CFTRP13569 NMD3P2-201ENST00000421815 761 ntBASIC10.4□□□□□ -0.74
CFTRP13569 CCNB1IP1P1-201ENST00000428976 839 ntBASIC10.4□□□□□ -0.74
CFTRP13569 AC126120.1-201ENST00000431082 470 ntBASIC10.4□□□□□ -0.74
CFTRP13569 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC10.4□□□□□ -0.74
CFTRP13569 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC10.4□□□□□ -0.74
CFTRP13569 RNU6-615P-201ENST00000516065 106 ntBASIC10.4□□□□□ -0.74
CFTRP13569 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC10.4□□□□□ -0.74
CFTRP13569 AC015818.6-201ENST00000584274 634 ntBASIC10.4□□□□□ -0.74
CFTRP13569 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC10.4□□□□□ -0.74
CFTRP13569 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
CFTRP13569 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC10.4□□□□□ -0.74
CFTRP13569 AL445649.1-201ENST00000615941 691 ntBASIC10.4□□□□□ -0.74
CFTRP13569 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CFTRP13569 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
CFTRP13569 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
CFTRP13569 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.75
CFTRP13569 AL049634.1-201ENST00000453770 1720 ntBASIC10.4□□□□□ -0.75
CFTRP13569 AC062029.1-202ENST00000606164 3651 ntBASIC10.39□□□□□ -0.75
CFTRP13569 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.75
CFTRP13569 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CFTRP13569 ARHGAP42P2-201ENST00000416089 2140 ntBASIC10.39□□□□□ -0.75
CFTRP13569 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC10.39□□□□□ -0.75
CFTRP13569 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
CFTRP13569 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
CFTRP13569 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
CFTRP13569 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
CFTRP13569 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
CFTRP13569 RNU11-6P-201ENST00000391127 133 ntBASIC10.39□□□□□ -0.75
CFTRP13569 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms