Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC020978.7-201ENST00000575953 1187 ntBASIC7.18□□□□□ -1.26
HOXC6P09630 AC015818.6-201ENST00000584274 634 ntBASIC7.18□□□□□ -1.26
HOXC6P09630 AC090236.2-201ENST00000587933 1101 ntBASIC7.18□□□□□ -1.26
HOXC6P09630 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
HOXC6P09630 AC073333.2-201ENST00000603589 769 ntBASIC7.18□□□□□ -1.26
HOXC6P09630 AL445647.2-201ENST00000615170 130 ntBASIC7.18□□□□□ -1.26
HOXC6P09630 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.18□□□□□ -1.26
HOXC6P09630 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.18□□□□□ -1.26
HOXC6P09630 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.18□□□□□ -1.26
HOXC6P09630 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXC6P09630 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXC6P09630 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXC6P09630 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HOXC6P09630 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HOXC6P09630 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
HOXC6P09630 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
HOXC6P09630 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.18□□□□□ -1.26
HOXC6P09630 MAPK10-323ENST00000641493 3207 ntBASIC7.18□□□□□ -1.26
HOXC6P09630 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.18□□□□□ -1.26
HOXC6P09630 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
HOXC6P09630 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HOXC6P09630 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXC6P09630 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXC6P09630 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
HOXC6P09630 AL133243.2-201ENST00000610331 1621 ntBASIC7.17□□□□□ -1.26
HOXC6P09630 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXC6P09630 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXC6P09630 MIR640-201ENST00000385086 96 ntBASIC7.17□□□□□ -1.26
HOXC6P09630 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
HOXC6P09630 RNA5SP178-201ENST00000410380 128 ntBASIC7.17□□□□□ -1.26
HOXC6P09630 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.17□□□□□ -1.26
HOXC6P09630 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC7.17□□□□□ -1.26
HOXC6P09630 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXC6P09630 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.17□□□□□ -1.26
HOXC6P09630 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXC6P09630 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 AL161636.2-201ENST00000445179 927 ntBASIC7.17□□□□□ -1.26
HOXC6P09630 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXC6P09630 SETP4-201ENST00000455717 868 ntBASIC7.17□□□□□ -1.26
HOXC6P09630 AC011476.1-201ENST00000466725 307 ntBASIC7.17□□□□□ -1.26
HOXC6P09630 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXC6P09630 CR383658.1-201ENST00000514609 734 ntBASIC7.17□□□□□ -1.26
HOXC6P09630 Y_RNA.667-201ENST00000516212 107 ntBASIC7.17□□□□□ -1.26
HOXC6P09630 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXC6P09630 AC090022.1-201ENST00000546569 311 ntBASIC7.17□□□□□ -1.26
HOXC6P09630 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXC6P09630 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXC6P09630 NPIPB1P-202ENST00000588786 828 ntBASIC7.17□□□□□ -1.26
HOXC6P09630 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.17□□□□□ -1.26
HOXC6P09630 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 AC126175.1-201ENST00000617041 758 ntBASIC7.17□□□□□ -1.26
HOXC6P09630 AC012653.2-201ENST00000621880 420 ntBASIC7.17□□□□□ -1.26
HOXC6P09630 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXC6P09630 AC008627.1-201ENST00000517511 1704 ntBASIC7.17□□□□□ -1.26
HOXC6P09630 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 AL133243.4-201ENST00000623116 3109 ntBASIC7.17□□□□□ -1.26
HOXC6P09630 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXC6P09630 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXC6P09630 MAPK10-365ENST00000641902 3825 ntBASIC7.17□□□□□ -1.26
HOXC6P09630 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HOXC6P09630 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.17□□□□□ -1.26
HOXC6P09630 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HOXC6P09630 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXC6P09630 AC027279.1-201ENST00000568885 4284 ntBASIC7.16□□□□□ -1.26
HOXC6P09630 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
HOXC6P09630 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXC6P09630 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXC6P09630 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXC6P09630 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXC6P09630 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXC6P09630 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXC6P09630 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXC6P09630 AL139384.2-201ENST00000613809 3590 ntBASIC7.16□□□□□ -1.26
HOXC6P09630 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HOXC6P09630 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXC6P09630 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXC6P09630 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HOXC6P09630 RN7SKP292-201ENST00000365522 317 ntBASIC7.16□□□□□ -1.26
HOXC6P09630 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.16□□□□□ -1.26
HOXC6P09630 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.16□□□□□ -1.26
HOXC6P09630 AL139156.3-201ENST00000454802 394 ntBASIC7.16□□□□□ -1.26
HOXC6P09630 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.16□□□□□ -1.26
HOXC6P09630 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HOXC6P09630 RN7SL177P-201ENST00000476596 299 ntBASIC7.16□□□□□ -1.26
HOXC6P09630 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.16□□□□□ -1.26
HOXC6P09630 AC090958.1-201ENST00000511122 351 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms