Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
LDLRP01130 AC005225.5-201ENST00000623547 2225 ntBASIC6.31□□□□□ -1.4
LDLRP01130 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.31□□□□□ -1.4
LDLRP01130 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.31□□□□□ -1.4
LDLRP01130 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LDLRP01130 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
LDLRP01130 AC005332.9-201ENST00000620266 2921 ntBASIC6.31□□□□□ -1.4
LDLRP01130 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LDLRP01130 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LDLRP01130 MTCO1P25-201ENST00000414449 1799 ntBASIC6.31□□□□□ -1.4
LDLRP01130 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.31□□□□□ -1.4
LDLRP01130 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.31□□□□□ -1.4
LDLRP01130 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LDLRP01130 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.3□□□□□ -1.4
LDLRP01130 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.3□□□□□ -1.4
LDLRP01130 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LDLRP01130 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
LDLRP01130 AP002800.1-201ENST00000624982 2225 ntBASIC6.3□□□□□ -1.4
LDLRP01130 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.3□□□□□ -1.4
LDLRP01130 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.3□□□□□ -1.4
LDLRP01130 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.3□□□□□ -1.4
LDLRP01130 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
LDLRP01130 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
LDLRP01130 AC007159.1-201ENST00000566529 4706 ntBASIC6.3□□□□□ -1.4
LDLRP01130 CDY19P-201ENST00000411668 1613 ntBASIC6.3□□□□□ -1.4
LDLRP01130 CDY18P-201ENST00000438294 1609 ntBASIC6.3□□□□□ -1.4
LDLRP01130 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
LDLRP01130 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.3□□□□□ -1.4
LDLRP01130 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LDLRP01130 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LDLRP01130 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LDLRP01130 RNA5SP308-201ENST00000362532 115 ntBASIC6.3□□□□□ -1.4
LDLRP01130 RN7SKP189-201ENST00000365042 330 ntBASIC6.3□□□□□ -1.4
LDLRP01130 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
LDLRP01130 OR7E156P-201ENST00000400303 464 ntBASIC6.3□□□□□ -1.4
LDLRP01130 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.3□□□□□ -1.4
LDLRP01130 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.3□□□□□ -1.4
LDLRP01130 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LDLRP01130 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.3□□□□□ -1.4
LDLRP01130 MGAT2P1-201ENST00000449718 797 ntBASIC6.3□□□□□ -1.4
LDLRP01130 RNU6-775P-201ENST00000459318 96 ntBASIC6.3□□□□□ -1.4
LDLRP01130 UGT2A3P7-201ENST00000510485 734 ntBASIC6.3□□□□□ -1.4
LDLRP01130 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LDLRP01130 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.3□□□□□ -1.4
LDLRP01130 IGLVV-66-201ENST00000523818 341 ntBASIC6.3□□□□□ -1.4
LDLRP01130 OR5D2P-201ENST00000524390 911 ntBASIC6.3□□□□□ -1.4
LDLRP01130 AP005639.1-201ENST00000526939 192 ntBASIC6.3□□□□□ -1.4
LDLRP01130 OR4A6P-201ENST00000534364 970 ntBASIC6.3□□□□□ -1.4
LDLRP01130 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.3□□□□□ -1.4
LDLRP01130 AC026826.3-201ENST00000561747 158 ntBASIC6.3□□□□□ -1.4
LDLRP01130 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.3□□□□□ -1.4
LDLRP01130 PPIAP14-201ENST00000577627 496 ntBASIC6.3□□□□□ -1.4
LDLRP01130 RN7SL230P-201ENST00000580835 303 ntBASIC6.3□□□□□ -1.4
LDLRP01130 AC079315.1-201ENST00000602952 623 ntBASIC6.3□□□□□ -1.4
LDLRP01130 AL049840.6-201ENST00000604583 345 ntBASIC6.3□□□□□ -1.4
LDLRP01130 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.3□□□□□ -1.4
LDLRP01130 AC068726.1-201ENST00000610993 341 ntBASIC6.3□□□□□ -1.4
LDLRP01130 AC012676.3-201ENST00000614983 479 ntBASIC6.3□□□□□ -1.4
LDLRP01130 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LDLRP01130 AL359742.1-201ENST00000622497 540 ntBASIC6.3□□□□□ -1.4
LDLRP01130 AP000577.1-201ENST00000624366 878 ntBASIC6.3□□□□□ -1.4
LDLRP01130 AC005858.3-201ENST00000624756 589 ntBASIC6.3□□□□□ -1.4
LDLRP01130 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
LDLRP01130 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
LDLRP01130 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.3□□□□□ -1.4
LDLRP01130 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
LDLRP01130 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LDLRP01130 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.29□□□□□ -1.4
LDLRP01130 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.29□□□□□ -1.4
LDLRP01130 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.29□□□□□ -1.4
LDLRP01130 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.29□□□□□ -1.4
LDLRP01130 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
LDLRP01130 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
LDLRP01130 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
LDLRP01130 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LDLRP01130 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
LDLRP01130 RN7SKP237-201ENST00000364663 301 ntBASIC6.29□□□□□ -1.4
LDLRP01130 AL451046.1-201ENST00000406097 534 ntBASIC6.29□□□□□ -1.4
LDLRP01130 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.29□□□□□ -1.4
LDLRP01130 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.29□□□□□ -1.4
LDLRP01130 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LDLRP01130 AL157385.1-201ENST00000446973 268 ntBASIC6.29□□□□□ -1.4
LDLRP01130 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.29□□□□□ -1.4
LDLRP01130 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.29□□□□□ -1.4
LDLRP01130 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.29□□□□□ -1.4
LDLRP01130 AL096803.1-201ENST00000456921 1021 ntBASIC6.29□□□□□ -1.4
LDLRP01130 RN7SL37P-201ENST00000490461 307 ntBASIC6.29□□□□□ -1.4
LDLRP01130 AC083906.1-201ENST00000509298 406 ntBASIC6.29□□□□□ -1.4
LDLRP01130 AC007537.1-201ENST00000539347 327 ntBASIC6.29□□□□□ -1.4
LDLRP01130 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.29□□□□□ -1.4
LDLRP01130 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.29□□□□□ -1.4
LDLRP01130 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.29□□□□□ -1.4
LDLRP01130 CTSLP2-201ENST00000580501 394 ntBASIC6.29□□□□□ -1.4
LDLRP01130 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
LDLRP01130 AC011447.2-201ENST00000592921 283 ntBASIC6.29□□□□□ -1.4
LDLRP01130 DYNLL1P1-201ENST00000595442 269 ntBASIC6.29□□□□□ -1.4
LDLRP01130 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.29□□□□□ -1.4
LDLRP01130 AC089999.3-201ENST00000622440 577 ntBASIC6.29□□□□□ -1.4
LDLRP01130 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.29□□□□□ -1.4
LDLRP01130 AC111152.1-202ENST00000635848 339 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms