Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.84□□□□□ -1.31
TIMP1P01033 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TIMP1P01033 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TIMP1P01033 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.84□□□□□ -1.31
TIMP1P01033 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TIMP1P01033 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC6.84□□□□□ -1.32
TIMP1P01033 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.84□□□□□ -1.32
TIMP1P01033 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.84□□□□□ -1.32
TIMP1P01033 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
TIMP1P01033 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.32
TIMP1P01033 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC6.84□□□□□ -1.32
TIMP1P01033 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
TIMP1P01033 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.83□□□□□ -1.32
TIMP1P01033 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.83□□□□□ -1.32
TIMP1P01033 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TIMP1P01033 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.83□□□□□ -1.32
TIMP1P01033 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.83□□□□□ -1.32
TIMP1P01033 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.83□□□□□ -1.32
TIMP1P01033 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TIMP1P01033 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TIMP1P01033 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.83□□□□□ -1.32
TIMP1P01033 AC119674.1-204ENST00000641348 1343 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.83□□□□□ -1.32
TIMP1P01033 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
TIMP1P01033 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TIMP1P01033 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TIMP1P01033 RN7SKP160-201ENST00000363804 340 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 AL096711.1-201ENST00000404780 554 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.83□□□□□ -1.32
TIMP1P01033 BX323845.3-201ENST00000428215 527 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.83□□□□□ -1.32
TIMP1P01033 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.83□□□□□ -1.32
TIMP1P01033 TRIM60P16-201ENST00000444048 694 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
TIMP1P01033 FTLP8-201ENST00000446770 267 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.83□□□□□ -1.32
TIMP1P01033 SNX18P26-201ENST00000458433 740 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.83□□□□□ -1.32
TIMP1P01033 EIF3LP3-201ENST00000495197 822 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.83□□□□□ -1.32
TIMP1P01033 IGKV2-18-201ENST00000522607 343 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.83□□□□□ -1.32
TIMP1P01033 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
TIMP1P01033 AP001858.2-201ENST00000536213 601 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
TIMP1P01033 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
TIMP1P01033 AL589674.2-201ENST00000604304 337 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.83□□□□□ -1.32
TIMP1P01033 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 OR1N1-202ENST00000619659 939 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 MIR7159-201ENST00000620587 66 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TIMP1P01033 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.83□□□□□ -1.32
TIMP1P01033 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.83□□□□□ -1.32
TIMP1P01033 AC008937.3-201ENST00000606813 1700 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.83□□□□□ -1.32
TIMP1P01033 Z83820.1-201ENST00000456978 1499 ntBASIC6.83□□□□□ -1.32
TIMP1P01033 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
TIMP1P01033 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.83□□□□□ -1.32
TIMP1P01033 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
TIMP1P01033 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
TIMP1P01033 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TIMP1P01033 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TIMP1P01033 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.83□□□□□ -1.32
TIMP1P01033 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TIMP1P01033 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TIMP1P01033 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
TIMP1P01033 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TIMP1P01033 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TIMP1P01033 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TIMP1P01033 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TIMP1P01033 MARK2P4-201ENST00000503381 2380 ntBASIC6.82□□□□□ -1.32
TIMP1P01033 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.82□□□□□ -1.32
TIMP1P01033 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC6.82□□□□□ -1.32
TIMP1P01033 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TIMP1P01033 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
TIMP1P01033 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TIMP1P01033 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TIMP1P01033 AC062022.1-201ENST00000451026 1684 ntBASIC6.82□□□□□ -1.32
TIMP1P01033 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
TIMP1P01033 SNORA58B-201ENST00000364259 136 ntBASIC6.82□□□□□ -1.32
TIMP1P01033 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.82□□□□□ -1.32
TIMP1P01033 AC245884.2-201ENST00000426257 404 ntBASIC6.82□□□□□ -1.32
TIMP1P01033 SUMO2P3-201ENST00000438311 288 ntBASIC6.82□□□□□ -1.32
TIMP1P01033 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.82□□□□□ -1.32
TIMP1P01033 SUMO2P1-206ENST00000445436 284 ntBASIC6.82□□□□□ -1.32
TIMP1P01033 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TIMP1P01033 RN7SL834P-201ENST00000461450 286 ntBASIC6.82□□□□□ -1.32
TIMP1P01033 RN7SL515P-201ENST00000463999 297 ntBASIC6.82□□□□□ -1.32
TIMP1P01033 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.82□□□□□ -1.32
TIMP1P01033 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.82□□□□□ -1.32
TIMP1P01033 Y_RNA.710-201ENST00000516975 110 ntBASIC6.82□□□□□ -1.32
TIMP1P01033 IGKV1D-22-201ENST00000518953 324 ntBASIC6.82□□□□□ -1.32
TIMP1P01033 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.82□□□□□ -1.32
TIMP1P01033 WBP1LP3-201ENST00000523033 208 ntBASIC6.82□□□□□ -1.32
TIMP1P01033 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TIMP1P01033 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.82□□□□□ -1.32
TIMP1P01033 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.82□□□□□ -1.32
TIMP1P01033 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
TIMP1P01033 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms