Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RPEP1-201ENST00000504507 658 ntBASIC2.64□□□□□ -1.99
USH2AO75445 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 AP006289.1-201ENST00000538089 277 ntBASIC2.64□□□□□ -1.99
USH2AO75445 MIR3189-201ENST00000578735 73 ntBASIC2.64□□□□□ -1.99
USH2AO75445 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 AC008785.1-201ENST00000624475 456 ntBASIC2.64□□□□□ -1.99
USH2AO75445 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 LINC02367-201ENST00000567749 4388 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 CLIP1-201ENST00000302528 5833 ntAPPRIS P4 TSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC2.64□□□□□ -1.99
USH2AO75445 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC2.64□□□□□ -1.99
USH2AO75445 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC2.64□□□□□ -1.99
USH2AO75445 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 RNA5SP335-201ENST00000363817 110 ntBASIC2.64□□□□□ -1.99
USH2AO75445 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC2.64□□□□□ -1.99
USH2AO75445 SLC35E1P1-201ENST00000419313 864 ntBASIC2.64□□□□□ -1.99
USH2AO75445 AC016712.1-201ENST00000431088 378 ntBASIC2.64□□□□□ -1.99
USH2AO75445 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 AC009237.1-201ENST00000442127 744 ntBASIC2.64□□□□□ -1.99
USH2AO75445 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC2.64□□□□□ -1.99
USH2AO75445 CYCSP42-201ENST00000450823 238 ntBASIC2.64□□□□□ -1.99
USH2AO75445 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 AC110056.1-201ENST00000525759 911 ntBASIC2.64□□□□□ -1.99
USH2AO75445 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 IGBP1P1-201ENST00000554337 1009 ntBASIC2.64□□□□□ -1.99
USH2AO75445 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 AC027229.1-201ENST00000583887 253 ntBASIC2.64□□□□□ -1.99
USH2AO75445 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC2.64□□□□□ -1.99
USH2AO75445 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 SEC22B-201ENST00000578049 6922 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 AC011933.2-201ENST00000578539 2790 ntBASIC2.64□□□□□ -1.99
USH2AO75445 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 SLITRK1-201ENST00000377084 5189 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
USH2AO75445 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 RGS8-201ENST00000258302 5606 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 RN7SKP28-201ENST00000364770 305 ntBASIC2.64□□□□□ -1.99
USH2AO75445 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC2.64□□□□□ -1.99
USH2AO75445 AC026402.1-201ENST00000513642 170 ntBASIC2.64□□□□□ -1.99
USH2AO75445 AC078899.1-201ENST00000521432 1185 ntBASIC2.64□□□□□ -1.99
USH2AO75445 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.64□□□□□ -1.99
USH2AO75445 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC2.64□□□□□ -1.99
USH2AO75445 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC2.64□□□□□ -1.99
USH2AO75445 RNA5SP305-201ENST00000362665 119 ntBASIC2.64□□□□□ -1.99
USH2AO75445 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 AC019050.1-201ENST00000418508 492 ntBASIC2.64□□□□□ -1.99
USH2AO75445 AL133325.1-201ENST00000421090 382 ntBASIC2.64□□□□□ -1.99
USH2AO75445 C4BPAP2-201ENST00000428434 478 ntBASIC2.64□□□□□ -1.99
USH2AO75445 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 AC011840.5-201ENST00000582125 771 ntBASIC2.64□□□□□ -1.99
USH2AO75445 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC2.64□□□□□ -1.99
USH2AO75445 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC2.64□□□□□ -1.99
USH2AO75445 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC2.64□□□□□ -1.99
USH2AO75445 ST8SIA3-201ENST00000324000 11833 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USH2AO75445 TOGARAM1-202ENST00000361577 6247 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
USH2AO75445 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms