Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 LINC00467-201ENST00000423222 3508 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 MAPK10-313ENST00000641405 2469 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
HOXA2O43364 Y_RNA.162-201ENST00000363683 102 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 Y_RNA.372-201ENST00000365599 102 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 RNVU1-15-201ENST00000384476 165 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 MIR181C-201ENST00000384881 110 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 TTC23-203ENST00000394132 3849 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 AC007068.1-201ENST00000396690 844 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC8.68□□□□□ -1.02
HOXA2O43364 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC8.68□□□□□ -1.02
HOXA2O43364 AC019050.1-201ENST00000418508 492 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 RPS26P13-201ENST00000419030 330 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 FABP7P1-201ENST00000424004 391 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 NANOGP4-201ENST00000427230 913 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC8.68□□□□□ -1.02
HOXA2O43364 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC8.68□□□□□ -1.02
HOXA2O43364 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC8.68□□□□□ -1.02
HOXA2O43364 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC8.68□□□□□ -1.02
HOXA2O43364 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC8.68□□□□□ -1.02
HOXA2O43364 AC013267.1-201ENST00000458227 267 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 AL122013.1-201ENST00000473054 801 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC8.68□□□□□ -1.02
HOXA2O43364 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC8.68□□□□□ -1.02
HOXA2O43364 OR7K1P-201ENST00000546439 926 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 THAP2-202ENST00000547843 672 ntTSL 2 BASIC8.68□□□□□ -1.02
HOXA2O43364 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC8.68□□□□□ -1.02
HOXA2O43364 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC8.68□□□□□ -1.02
HOXA2O43364 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
HOXA2O43364 AC243312.1-201ENST00000570582 275 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC8.68□□□□□ -1.02
HOXA2O43364 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.68□□□□□ -1.02
HOXA2O43364 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
HOXA2O43364 AC005498.1-201ENST00000592125 465 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 VN1R79P-201ENST00000593540 513 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 AC113554.1-201ENST00000606284 490 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 MIR6127-201ENST00000614019 109 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 DRICH1-202ENST00000614553 687 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.68□□□□□ -1.02
HOXA2O43364 AC018816.2-201ENST00000621460 353 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC8.68□□□□□ -1.02
HOXA2O43364 VPS8-228ENST00000628962 207 ntTSL 5 BASIC8.68□□□□□ -1.02
HOXA2O43364 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
HOXA2O43364 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.68□□□□□ -1.02
HOXA2O43364 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 MARK2P10-201ENST00000454959 1437 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 AC092111.2-201ENST00000611627 1414 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
HOXA2O43364 SORBS2-206ENST00000393528 3043 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 PABPC1P9-201ENST00000426076 1612 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
HOXA2O43364 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 LINC00672-201ENST00000583195 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 ADD2-204ENST00000407644 3741 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.68□□□□□ -1.02
HOXA2O43364 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 AC093768.1-201ENST00000505987 2173 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 AL133279.3-201ENST00000563140 2352 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 AC051619.3-201ENST00000560646 2426 ntBASIC8.68□□□□□ -1.02
HOXA2O43364 ZNF35-201ENST00000296092 2503 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
HOXA2O43364 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXA2O43364 PREPL-204ENST00000409272 3030 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
HOXA2O43364 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXA2O43364 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
HOXA2O43364 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HOXA2O43364 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
HOXA2O43364 PMS2CL-204ENST00000486256 3327 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HOXA2O43364 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXA2O43364 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXA2O43364 ZNF611-204ENST00000543227 4517 ntAPPRIS P1 TSL 4 BASIC8.67□□□□□ -1.02
HOXA2O43364 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HOXA2O43364 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXA2O43364 CLEC4M-201ENST00000248228 1865 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
HOXA2O43364 AC010132.2-201ENST00000295493 1043 ntBASIC8.67□□□□□ -1.02
HOXA2O43364 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXA2O43364 CARF-201ENST00000320443 5209 ntTSL 2 BASIC8.67□□□□□ -1.02
HOXA2O43364 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.67□□□□□ -1.02
HOXA2O43364 Y_RNA.311-201ENST00000365068 96 ntBASIC8.67□□□□□ -1.02
HOXA2O43364 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
HOXA2O43364 NFYC-203ENST00000372652 2363 ntTSL 2 BASIC8.67□□□□□ -1.02
HOXA2O43364 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXA2O43364 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC8.67□□□□□ -1.02
HOXA2O43364 DCLRE1C-207ENST00000378255 2807 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
HOXA2O43364 TMEM52B-203ENST00000381923 2601 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
HOXA2O43364 MIR142-201ENST00000384835 87 ntBASIC8.67□□□□□ -1.02
HOXA2O43364 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
HOXA2O43364 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms