Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCA3PQ9Y6N3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLCA3PQ9Y6N3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.69■□□□□ 0.58
CLCA3PQ9Y6N3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLCA3PQ9Y6N3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
CLCA3PQ9Y6N3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.69■□□□□ 0.58
CLCA3PQ9Y6N3 GABARAPL3-202ENST00000624044 1851 ntBASIC18.69■□□□□ 0.58
CLCA3PQ9Y6N3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLCA3PQ9Y6N3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 AC008687.6-201ENST00000596318 630 ntBASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLCA3PQ9Y6N3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 PCDHAC2-203ENST00000615316 3011 ntBASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 KRT17P3-201ENST00000420566 1262 ntBASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCA3PQ9Y6N3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 KRT16P6-202ENST00000425692 1426 ntBASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 ABHD17AP1-201ENST00000358206 933 ntBASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 AC008403.3-201ENST00000598924 454 ntBASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 AC006058.3-201ENST00000606217 1069 ntBASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 AC120498.8-201ENST00000614275 531 ntBASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCA3PQ9Y6N3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLCA3PQ9Y6N3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCA3PQ9Y6N3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCA3PQ9Y6N3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCA3PQ9Y6N3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms