Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CLIC4Q9Y696 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CLIC4Q9Y696 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLIC4Q9Y696 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLIC4Q9Y696 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLIC4Q9Y696 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLIC4Q9Y696 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.58■■□□□ 1.21
CLIC4Q9Y696 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC22.58■■□□□ 1.21
CLIC4Q9Y696 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.58■■□□□ 1.21
CLIC4Q9Y696 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLIC4Q9Y696 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLIC4Q9Y696 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CLIC4Q9Y696 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.58■■□□□ 1.21
CLIC4Q9Y696 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CLIC4Q9Y696 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.21
CLIC4Q9Y696 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.58■■□□□ 1.21
CLIC4Q9Y696 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CLIC4Q9Y696 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.58■■□□□ 1.2
CLIC4Q9Y696 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.58■■□□□ 1.2
CLIC4Q9Y696 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CLIC4Q9Y696 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.58■■□□□ 1.2
CLIC4Q9Y696 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
CLIC4Q9Y696 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CLIC4Q9Y696 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.57■■□□□ 1.2
CLIC4Q9Y696 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLIC4Q9Y696 GUSBP6-202ENST00000438529 1198 ntBASIC22.57■■□□□ 1.2
CLIC4Q9Y696 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CLIC4Q9Y696 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.57■■□□□ 1.2
CLIC4Q9Y696 AL121832.2-201ENST00000610979 668 ntBASIC22.57■■□□□ 1.2
CLIC4Q9Y696 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.57■■□□□ 1.2
CLIC4Q9Y696 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.57■■□□□ 1.2
CLIC4Q9Y696 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLIC4Q9Y696 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLIC4Q9Y696 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CLIC4Q9Y696 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
CLIC4Q9Y696 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CLIC4Q9Y696 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.57■■□□□ 1.2
CLIC4Q9Y696 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.56■■□□□ 1.2
CLIC4Q9Y696 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.56■■□□□ 1.2
CLIC4Q9Y696 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
CLIC4Q9Y696 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 MFF-205ENST00000354503 1085 ntTSL 2 BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 AC006970.2-201ENST00000450065 779 ntBASIC22.55■■□□□ 1.2
CLIC4Q9Y696 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CLIC4Q9Y696 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms