Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 KRT8P17-201ENST00000453110 1448 ntBASIC18.5■□□□□ 0.55
IFT52Q9Y366 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFT52Q9Y366 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFT52Q9Y366 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFT52Q9Y366 CYP2T1P-201ENST00000432607 1285 ntBASIC18.5■□□□□ 0.55
IFT52Q9Y366 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFT52Q9Y366 CYP2T3P-201ENST00000601990 817 ntBASIC18.5■□□□□ 0.55
IFT52Q9Y366 OR10C1-204ENST00000622521 1039 ntBASIC18.5■□□□□ 0.55
IFT52Q9Y366 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IFT52Q9Y366 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
IFT52Q9Y366 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFT52Q9Y366 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
IFT52Q9Y366 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFT52Q9Y366 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFT52Q9Y366 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.5■□□□□ 0.55
IFT52Q9Y366 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IFT52Q9Y366 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.5■□□□□ 0.55
IFT52Q9Y366 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
IFT52Q9Y366 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.49■□□□□ 0.55
IFT52Q9Y366 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFT52Q9Y366 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.49■□□□□ 0.55
IFT52Q9Y366 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT52Q9Y366 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT52Q9Y366 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
IFT52Q9Y366 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT52Q9Y366 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
IFT52Q9Y366 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
IFT52Q9Y366 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT52Q9Y366 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT52Q9Y366 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT52Q9Y366 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT52Q9Y366 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.49■□□□□ 0.55
IFT52Q9Y366 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFT52Q9Y366 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.49■□□□□ 0.55
IFT52Q9Y366 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.49■□□□□ 0.55
IFT52Q9Y366 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT52Q9Y366 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
IFT52Q9Y366 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
IFT52Q9Y366 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.49■□□□□ 0.55
IFT52Q9Y366 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IFT52Q9Y366 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.49■□□□□ 0.55
IFT52Q9Y366 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT52Q9Y366 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.49■□□□□ 0.55
IFT52Q9Y366 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT52Q9Y366 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IFT52Q9Y366 KRT16P6-202ENST00000425692 1426 ntBASIC18.49■□□□□ 0.55
IFT52Q9Y366 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFT52Q9Y366 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFT52Q9Y366 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.48■□□□□ 0.55
IFT52Q9Y366 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFT52Q9Y366 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFT52Q9Y366 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFT52Q9Y366 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFT52Q9Y366 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.48■□□□□ 0.55
IFT52Q9Y366 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.48■□□□□ 0.55
IFT52Q9Y366 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.48■□□□□ 0.55
IFT52Q9Y366 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.48■□□□□ 0.55
IFT52Q9Y366 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.48■□□□□ 0.55
IFT52Q9Y366 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
IFT52Q9Y366 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.48■□□□□ 0.55
IFT52Q9Y366 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFT52Q9Y366 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFT52Q9Y366 PTBP1P-201ENST00000554374 1601 ntBASIC18.48■□□□□ 0.55
IFT52Q9Y366 KRT8P20-201ENST00000423953 1409 ntBASIC18.48■□□□□ 0.55
IFT52Q9Y366 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFT52Q9Y366 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFT52Q9Y366 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IFT52Q9Y366 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IFT52Q9Y366 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
IFT52Q9Y366 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IFT52Q9Y366 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IFT52Q9Y366 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.47■□□□□ 0.55
IFT52Q9Y366 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
IFT52Q9Y366 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFT52Q9Y366 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IFT52Q9Y366 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.47■□□□□ 0.55
IFT52Q9Y366 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.47■□□□□ 0.55
IFT52Q9Y366 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.47■□□□□ 0.55
IFT52Q9Y366 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.47■□□□□ 0.55
IFT52Q9Y366 AL031963.3-201ENST00000606441 850 ntBASIC18.47■□□□□ 0.55
IFT52Q9Y366 AL589743.5-201ENST00000616611 1050 ntBASIC18.47■□□□□ 0.55
IFT52Q9Y366 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.47■□□□□ 0.55
IFT52Q9Y366 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
IFT52Q9Y366 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFT52Q9Y366 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFT52Q9Y366 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IFT52Q9Y366 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFT52Q9Y366 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IFT52Q9Y366 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IFT52Q9Y366 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IFT52Q9Y366 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
IFT52Q9Y366 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
IFT52Q9Y366 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.46■□□□□ 0.55
IFT52Q9Y366 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFT52Q9Y366 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IFT52Q9Y366 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
IFT52Q9Y366 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IFT52Q9Y366 AC005082.1-201ENST00000413042 2259 ntBASIC18.46■□□□□ 0.55
IFT52Q9Y366 AL512625.2-201ENST00000417533 625 ntBASIC18.46■□□□□ 0.55
IFT52Q9Y366 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms