Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 DUX4L16-201ENST00000555130 1264 ntBASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 AL162412.1-201ENST00000567129 965 ntBASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 FAM21FP-204ENST00000608637 956 ntBASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 AC231657.2-201ENST00000624556 255 ntBASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HHLA3Q9XRX5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 AC007322.1-201ENST00000426983 750 ntBASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HHLA3Q9XRX5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 AC007613.1-201ENST00000572811 2597 ntBASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 AC008694.1-202ENST00000636953 945 ntBASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HHLA3Q9XRX5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms