Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LHX6Q9UPM6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 KSR1P1-201ENST00000446298 240 ntBASIC18.72■□□□□ 0.59
LHX6Q9UPM6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 AL137060.1-201ENST00000618151 2648 ntBASIC18.72■□□□□ 0.59
LHX6Q9UPM6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
LHX6Q9UPM6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 AC116050.2-201ENST00000612102 1779 ntBASIC18.71■□□□□ 0.59
LHX6Q9UPM6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 PGM5P4-201ENST00000421970 445 ntBASIC18.71■□□□□ 0.59
LHX6Q9UPM6 YBX1P2-201ENST00000489612 999 ntBASIC18.71■□□□□ 0.59
LHX6Q9UPM6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 KRT16P1-201ENST00000399124 1418 ntBASIC18.71■□□□□ 0.59
LHX6Q9UPM6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LHX6Q9UPM6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
LHX6Q9UPM6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 MTND2P7-201ENST00000521337 640 ntBASIC18.7■□□□□ 0.58
LHX6Q9UPM6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 FAM87A-204ENST00000613235 858 ntBASIC18.7■□□□□ 0.58
LHX6Q9UPM6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LHX6Q9UPM6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LHX6Q9UPM6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms