Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SSR3Q9UNL2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SSR3Q9UNL2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 KRT16P2-201ENST00000414673 1423 ntBASIC17.62■□□□□ 0.41
SSR3Q9UNL2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SSR3Q9UNL2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSR3Q9UNL2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSR3Q9UNL2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SSR3Q9UNL2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSR3Q9UNL2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
SSR3Q9UNL2 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSR3Q9UNL2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSR3Q9UNL2 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSR3Q9UNL2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSR3Q9UNL2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSR3Q9UNL2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.61■□□□□ 0.41
SSR3Q9UNL2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSR3Q9UNL2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SSR3Q9UNL2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSR3Q9UNL2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SSR3Q9UNL2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms