Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HCFC1R1Q9NWW0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 AC073508.3-201ENST00000619697 1419 ntBASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 SMG8-203ENST00000578922 2178 ntBASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 B3GAT3P1-201ENST00000471720 806 ntBASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 AL590326.2-201ENST00000625139 305 ntBASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.62■□□□□ 0.89
HCFC1R1Q9NWW0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HCFC1R1Q9NWW0 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.61■□□□□ 0.89
HCFC1R1Q9NWW0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.61■□□□□ 0.89
HCFC1R1Q9NWW0 AC004980.1-204ENST00000429707 299 ntBASIC20.61■□□□□ 0.89
HCFC1R1Q9NWW0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.61■□□□□ 0.89
HCFC1R1Q9NWW0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.61■□□□□ 0.89
HCFC1R1Q9NWW0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.61■□□□□ 0.89
HCFC1R1Q9NWW0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC1R1Q9NWW0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC1R1Q9NWW0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HCFC1R1Q9NWW0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 TUBB8P6-201ENST00000436895 1288 ntBASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 AC010203.1-204ENST00000548782 407 ntBASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 AC026271.3-201ENST00000571884 352 ntBASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 PHGDH-210ENST00000641115 1638 ntBASIC20.6■□□□□ 0.89
HCFC1R1Q9NWW0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HCFC1R1Q9NWW0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HCFC1R1Q9NWW0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HCFC1R1Q9NWW0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.59■□□□□ 0.89
HCFC1R1Q9NWW0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HCFC1R1Q9NWW0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HCFC1R1Q9NWW0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
HCFC1R1Q9NWW0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.59■□□□□ 0.89
HCFC1R1Q9NWW0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
HCFC1R1Q9NWW0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HCFC1R1Q9NWW0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HCFC1R1Q9NWW0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.59■□□□□ 0.89
HCFC1R1Q9NWW0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.59■□□□□ 0.89
HCFC1R1Q9NWW0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HCFC1R1Q9NWW0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HCFC1R1Q9NWW0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HCFC1R1Q9NWW0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.58■□□□□ 0.89
HCFC1R1Q9NWW0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HCFC1R1Q9NWW0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.58■□□□□ 0.89
HCFC1R1Q9NWW0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HCFC1R1Q9NWW0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HCFC1R1Q9NWW0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.58■□□□□ 0.89
HCFC1R1Q9NWW0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.58■□□□□ 0.89
HCFC1R1Q9NWW0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.58■□□□□ 0.89
HCFC1R1Q9NWW0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
HCFC1R1Q9NWW0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.58■□□□□ 0.89
HCFC1R1Q9NWW0 AC104076.2-201ENST00000448912 469 ntBASIC20.58■□□□□ 0.89
HCFC1R1Q9NWW0 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.58■□□□□ 0.89
HCFC1R1Q9NWW0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HCFC1R1Q9NWW0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.58■□□□□ 0.89
HCFC1R1Q9NWW0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
HCFC1R1Q9NWW0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HCFC1R1Q9NWW0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms