Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 AC069236.1-201ENST00000604339 616 ntBASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 AC008694.1-202ENST00000636953 945 ntBASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.43■□□□□ 0.22
LIN7CQ9NUP9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 MIR663A-201ENST00000385250 93 ntBASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 AC006970.2-201ENST00000450065 779 ntBASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 AC090192.1-201ENST00000517740 490 ntBASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 RNF165-205ENST00000588679 2904 ntBASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LIN7CQ9NUP9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 CYP2T1P-201ENST00000432607 1285 ntBASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LIN7CQ9NUP9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 CROCCP5-201ENST00000436658 830 ntBASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 OR10C1-204ENST00000622521 1039 ntBASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LIN7CQ9NUP9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms