Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
POLR2J3Q9H1A7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 AC006015.1-201ENST00000429970 570 ntBASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
POLR2J3Q9H1A7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
POLR2J3Q9H1A7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
POLR2J3Q9H1A7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.27■□□□□ 0.51
POLR2J3Q9H1A7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
POLR2J3Q9H1A7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
POLR2J3Q9H1A7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
POLR2J3Q9H1A7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 AP001271.2-201ENST00000624018 1556 ntBASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 HLA-G-202ENST00000376815 851 ntBASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 HLA-G-203ENST00000376818 1127 ntBASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 AC231657.2-201ENST00000624556 255 ntBASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 AC008694.1-202ENST00000636953 945 ntBASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
POLR2J3Q9H1A7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 CYP2T3P-201ENST00000601990 817 ntBASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
POLR2J3Q9H1A7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 TNXA-203ENST00000507684 2038 ntBASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 AC011767.1-201ENST00000617410 1153 ntBASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.24■□□□□ 0.51
POLR2J3Q9H1A7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms