Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF38Q9H0F5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 ECEL1P3-201ENST00000427961 737 ntBASIC20.55■□□□□ 0.88
RNF38Q9H0F5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 AP003071.4-201ENST00000562276 1284 ntBASIC20.55■□□□□ 0.88
RNF38Q9H0F5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 AL353708.3-201ENST00000610272 989 ntBASIC20.55■□□□□ 0.88
RNF38Q9H0F5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 PHGDH-210ENST00000641115 1638 ntBASIC20.55■□□□□ 0.88
RNF38Q9H0F5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF38Q9H0F5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 AP002982.1-201ENST00000492365 877 ntBASIC20.54■□□□□ 0.88
RNF38Q9H0F5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 BX119927.1-201ENST00000636596 1552 ntBASIC20.54■□□□□ 0.88
RNF38Q9H0F5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.54■□□□□ 0.88
RNF38Q9H0F5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 RNF165-205ENST00000588679 2904 ntBASIC20.53■□□□□ 0.88
RNF38Q9H0F5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF38Q9H0F5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 AL355355.2-201ENST00000442321 338 ntBASIC20.52■□□□□ 0.88
RNF38Q9H0F5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF38Q9H0F5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms