Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM2Q9C040 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM2Q9C040 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM2Q9C040 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM2Q9C040 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM2Q9C040 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM2Q9C040 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM2Q9C040 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM2Q9C040 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM2Q9C040 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM2Q9C040 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM2Q9C040 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM2Q9C040 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
TRIM2Q9C040 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM2Q9C040 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM2Q9C040 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM2Q9C040 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM2Q9C040 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM2Q9C040 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM2Q9C040 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM2Q9C040 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM2Q9C040 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM2Q9C040 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM2Q9C040 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM2Q9C040 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRIM2Q9C040 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM2Q9C040 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRIM2Q9C040 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM2Q9C040 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM2Q9C040 MKRN4P-201ENST00000444706 1521 ntBASIC18.18■□□□□ 0.5
TRIM2Q9C040 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM2Q9C040 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM2Q9C040 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM2Q9C040 AP001271.2-201ENST00000624018 1556 ntBASIC18.18■□□□□ 0.5
TRIM2Q9C040 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM2Q9C040 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM2Q9C040 SLC29A4P1-201ENST00000398760 971 ntBASIC18.18■□□□□ 0.5
TRIM2Q9C040 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRIM2Q9C040 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM2Q9C040 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM2Q9C040 AC105036.2-201ENST00000569468 176 ntBASIC18.18■□□□□ 0.5
TRIM2Q9C040 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM2Q9C040 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM2Q9C040 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM2Q9C040 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM2Q9C040 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM2Q9C040 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM2Q9C040 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM2Q9C040 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM2Q9C040 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM2Q9C040 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM2Q9C040 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRIM2Q9C040 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM2Q9C040 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM2Q9C040 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM2Q9C040 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM2Q9C040 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM2Q9C040 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM2Q9C040 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM2Q9C040 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM2Q9C040 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms