Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 HLA-A-209ENST00000638375 975 ntBASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 AC018553.1-201ENST00000616682 1458 ntBASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 RCC2P6-201ENST00000526625 1557 ntBASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
KRTAP4-1Q9BYQ7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 GRAMD4P8-201ENST00000605465 1115 ntBASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 DGCR10-201ENST00000609839 495 ntBASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 AL117328.2-201ENST00000624617 1940 ntBASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
KRTAP4-1Q9BYQ7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 AC133561.1-201ENST00000568600 2415 ntBASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 HIST1H2APS4-201ENST00000362070 348 ntBASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 BX664615.1-201ENST00000443558 458 ntBASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 AP000692.2-201ENST00000608391 879 ntBASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 GOLGA6L3-201ENST00000507199 1679 ntBASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
KRTAP4-1Q9BYQ7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP4-1Q9BYQ7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP4-1Q9BYQ7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP4-1Q9BYQ7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
KRTAP4-1Q9BYQ7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP4-1Q9BYQ7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
KRTAP4-1Q9BYQ7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms