Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC24.18■■□□□ 1.46
RTFDC1Q9BY42 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RTFDC1Q9BY42 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
RTFDC1Q9BY42 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 AP000692.2-201ENST00000608391 879 ntBASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 AC005229.4-201ENST00000610085 2198 ntBASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RTFDC1Q9BY42 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 AC022616.7-201ENST00000525383 220 ntBASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 AC026310.3-201ENST00000625186 2373 ntBASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTFDC1Q9BY42 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 AK4P3-201ENST00000418260 669 ntBASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 TUBB8P6-201ENST00000436895 1288 ntBASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 FDX2-206ENST00000492239 773 ntTSL 2 BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 MYC-208ENST00000641036 567 ntBASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTFDC1Q9BY42 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RTFDC1Q9BY42 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
RTFDC1Q9BY42 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RTFDC1Q9BY42 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
RTFDC1Q9BY42 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RTFDC1Q9BY42 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RTFDC1Q9BY42 ISCU-203ENST00000431221 799 ntTSL 2 BASIC24.14■■□□□ 1.45
RTFDC1Q9BY42 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.14■■□□□ 1.45
RTFDC1Q9BY42 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RTFDC1Q9BY42 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RTFDC1Q9BY42 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTFDC1Q9BY42 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
RTFDC1Q9BY42 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTFDC1Q9BY42 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.14■■□□□ 1.45
RTFDC1Q9BY42 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.14■■□□□ 1.45
RTFDC1Q9BY42 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RTFDC1Q9BY42 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 AC018553.1-201ENST00000616682 1458 ntBASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 AC008040.2-201ENST00000461049 708 ntBASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 AC091390.4-202ENST00000476426 537 ntBASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 AL138966.2-201ENST00000621997 464 ntBASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTFDC1Q9BY42 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTFDC1Q9BY42 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC24.12■■□□□ 1.45
RTFDC1Q9BY42 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTFDC1Q9BY42 FAM8A6P-201ENST00000407496 1135 ntBASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms