Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP4Q99727 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP4Q99727 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP4Q99727 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP4Q99727 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP4Q99727 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TIMP4Q99727 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.17■□□□□ 0.5
TIMP4Q99727 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.16■□□□□ 0.5
TIMP4Q99727 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP4Q99727 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP4Q99727 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.16■□□□□ 0.5
TIMP4Q99727 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP4Q99727 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP4Q99727 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.16■□□□□ 0.5
TIMP4Q99727 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP4Q99727 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP4Q99727 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP4Q99727 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP4Q99727 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP4Q99727 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TIMP4Q99727 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP4Q99727 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP4Q99727 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TIMP4Q99727 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TIMP4Q99727 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TIMP4Q99727 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.16■□□□□ 0.5
TIMP4Q99727 AC233263.1-201ENST00000578059 224 ntBASIC18.16■□□□□ 0.5
TIMP4Q99727 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP4Q99727 AC069544.1-201ENST00000609399 999 ntBASIC18.16■□□□□ 0.5
TIMP4Q99727 AC120498.8-201ENST00000614275 531 ntBASIC18.16■□□□□ 0.5
TIMP4Q99727 AP006294.2-201ENST00000641667 209 ntBASIC18.16■□□□□ 0.5
TIMP4Q99727 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TIMP4Q99727 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP4Q99727 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
TIMP4Q99727 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TIMP4Q99727 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TIMP4Q99727 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TIMP4Q99727 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
TIMP4Q99727 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.15■□□□□ 0.5
TIMP4Q99727 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TIMP4Q99727 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TIMP4Q99727 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TIMP4Q99727 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.15■□□□□ 0.5
TIMP4Q99727 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TIMP4Q99727 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.15■□□□□ 0.5
TIMP4Q99727 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
TIMP4Q99727 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.15■□□□□ 0.5
TIMP4Q99727 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TIMP4Q99727 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.15■□□□□ 0.5
TIMP4Q99727 AL359736.2-201ENST00000621992 437 ntBASIC18.15■□□□□ 0.5
TIMP4Q99727 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TIMP4Q99727 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.15■□□□□ 0.5
TIMP4Q99727 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TIMP4Q99727 AC087289.5-201ENST00000586076 3175 ntBASIC18.14■□□□□ 0.49
TIMP4Q99727 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.14■□□□□ 0.49
TIMP4Q99727 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP4Q99727 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
TIMP4Q99727 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TIMP4Q99727 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP4Q99727 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.14■□□□□ 0.49
TIMP4Q99727 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TIMP4Q99727 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.14■□□□□ 0.49
TIMP4Q99727 RPPH1-201ENST00000516869 333 ntBASIC18.14■□□□□ 0.49
TIMP4Q99727 C1QBPP2-201ENST00000528754 825 ntBASIC18.14■□□□□ 0.49
TIMP4Q99727 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.14■□□□□ 0.49
TIMP4Q99727 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TIMP4Q99727 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP4Q99727 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP4Q99727 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TIMP4Q99727 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP4Q99727 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TIMP4Q99727 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TIMP4Q99727 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TIMP4Q99727 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TIMP4Q99727 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
TIMP4Q99727 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.13■□□□□ 0.49
TIMP4Q99727 AC116562.4-201ENST00000641316 2276 ntBASIC18.13■□□□□ 0.49
TIMP4Q99727 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.13■□□□□ 0.49
TIMP4Q99727 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms