Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A3Q99624 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC38A3Q99624 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC38A3Q99624 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SLC38A3Q99624 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC38A3Q99624 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC38A3Q99624 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SLC38A3Q99624 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC38A3Q99624 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A3Q99624 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC38A3Q99624 AP006587.1-201ENST00000534129 1502 ntBASIC19.2■□□□□ 0.66
SLC38A3Q99624 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC38A3Q99624 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLC38A3Q99624 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A3Q99624 AC007375.3-201ENST00000600936 2314 ntBASIC19.19■□□□□ 0.66
SLC38A3Q99624 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A3Q99624 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A3Q99624 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A3Q99624 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLC38A3Q99624 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC38A3Q99624 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A3Q99624 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SLC38A3Q99624 AP002982.1-201ENST00000492365 877 ntBASIC19.19■□□□□ 0.66
SLC38A3Q99624 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC38A3Q99624 REXO1L12P-201ENST00000622156 912 ntBASIC19.19■□□□□ 0.66
SLC38A3Q99624 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.19■□□□□ 0.66
SLC38A3Q99624 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.19■□□□□ 0.66
SLC38A3Q99624 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A3Q99624 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC38A3Q99624 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A3Q99624 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC38A3Q99624 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A3Q99624 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A3Q99624 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SLC38A3Q99624 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLC38A3Q99624 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A3Q99624 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC38A3Q99624 SMG8-203ENST00000578922 2178 ntBASIC19.19■□□□□ 0.66
SLC38A3Q99624 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
SLC38A3Q99624 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC38A3Q99624 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC38A3Q99624 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A3Q99624 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A3Q99624 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A3Q99624 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC38A3Q99624 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SLC38A3Q99624 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A3Q99624 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC38A3Q99624 AL355355.2-201ENST00000442321 338 ntBASIC19.18■□□□□ 0.66
SLC38A3Q99624 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC38A3Q99624 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC38A3Q99624 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC38A3Q99624 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC38A3Q99624 CD177P1-201ENST00000606252 935 ntBASIC19.18■□□□□ 0.66
SLC38A3Q99624 AC073195.1-201ENST00000607241 877 ntBASIC19.18■□□□□ 0.66
SLC38A3Q99624 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC38A3Q99624 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC38A3Q99624 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC38A3Q99624 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A3Q99624 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A3Q99624 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC38A3Q99624 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A3Q99624 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC38A3Q99624 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC38A3Q99624 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A3Q99624 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SLC38A3Q99624 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A3Q99624 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC38A3Q99624 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SLC38A3Q99624 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC38A3Q99624 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLC38A3Q99624 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A3Q99624 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A3Q99624 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC38A3Q99624 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A3Q99624 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC38A3Q99624 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC38A3Q99624 FAM197Y1-201ENST00000421178 764 ntBASIC19.17■□□□□ 0.66
SLC38A3Q99624 BX088651.1-201ENST00000540551 451 ntBASIC19.17■□□□□ 0.66
SLC38A3Q99624 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC38A3Q99624 AC026471.5-201ENST00000615068 467 ntBASIC19.17■□□□□ 0.66
SLC38A3Q99624 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC38A3Q99624 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A3Q99624 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC38A3Q99624 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A3Q99624 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC38A3Q99624 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A3Q99624 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A3Q99624 AC116351.2-201ENST00000606540 1585 ntBASIC19.16■□□□□ 0.66
SLC38A3Q99624 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC38A3Q99624 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SLC38A3Q99624 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A3Q99624 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.16■□□□□ 0.66
SLC38A3Q99624 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.16■□□□□ 0.66
SLC38A3Q99624 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A3Q99624 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A3Q99624 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A3Q99624 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
SLC38A3Q99624 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC38A3Q99624 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms