Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNX18Q96RF0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.98■□□□□ 0.47
SNX18Q96RF0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNX18Q96RF0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.98■□□□□ 0.47
SNX18Q96RF0 AC006970.2-201ENST00000450065 779 ntBASIC17.98■□□□□ 0.47
SNX18Q96RF0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.98■□□□□ 0.47
SNX18Q96RF0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SNX18Q96RF0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
SNX18Q96RF0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.98■□□□□ 0.47
SNX18Q96RF0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
SNX18Q96RF0 AC011767.1-201ENST00000617410 1153 ntBASIC17.98■□□□□ 0.47
SNX18Q96RF0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNX18Q96RF0 BX119927.1-201ENST00000636596 1552 ntBASIC17.98■□□□□ 0.47
SNX18Q96RF0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.98■□□□□ 0.47
SNX18Q96RF0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.98■□□□□ 0.47
SNX18Q96RF0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNX18Q96RF0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNX18Q96RF0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.98■□□□□ 0.47
SNX18Q96RF0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.98■□□□□ 0.47
SNX18Q96RF0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SNX18Q96RF0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNX18Q96RF0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX18Q96RF0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.97■□□□□ 0.47
SNX18Q96RF0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX18Q96RF0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX18Q96RF0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNX18Q96RF0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.97■□□□□ 0.47
SNX18Q96RF0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX18Q96RF0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX18Q96RF0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX18Q96RF0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SNX18Q96RF0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNX18Q96RF0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.97■□□□□ 0.47
SNX18Q96RF0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.97■□□□□ 0.47
SNX18Q96RF0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.97■□□□□ 0.47
SNX18Q96RF0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNX18Q96RF0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX18Q96RF0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX18Q96RF0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX18Q96RF0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX18Q96RF0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.97■□□□□ 0.47
SNX18Q96RF0 LTB4R2-202ENST00000528054 3092 ntBASIC17.97■□□□□ 0.47
SNX18Q96RF0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNX18Q96RF0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNX18Q96RF0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SNX18Q96RF0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX18Q96RF0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.96■□□□□ 0.47
SNX18Q96RF0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNX18Q96RF0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.96■□□□□ 0.47
SNX18Q96RF0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SNX18Q96RF0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SNX18Q96RF0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.96■□□□□ 0.47
SNX18Q96RF0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.96■□□□□ 0.47
SNX18Q96RF0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.96■□□□□ 0.47
SNX18Q96RF0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNX18Q96RF0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.96■□□□□ 0.47
SNX18Q96RF0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SNX18Q96RF0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.95■□□□□ 0.46
SNX18Q96RF0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX18Q96RF0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX18Q96RF0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX18Q96RF0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.95■□□□□ 0.46
SNX18Q96RF0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SNX18Q96RF0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.95■□□□□ 0.46
SNX18Q96RF0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.95■□□□□ 0.46
SNX18Q96RF0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNX18Q96RF0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX18Q96RF0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 TMEM179-206ENST00000616017 1645 ntBASIC17.94■□□□□ 0.46
SNX18Q96RF0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX18Q96RF0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX18Q96RF0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX18Q96RF0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SNX18Q96RF0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX18Q96RF0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX18Q96RF0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNX18Q96RF0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.94■□□□□ 0.46
SNX18Q96RF0 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.94■□□□□ 0.46
SNX18Q96RF0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms