Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPGRIP1Q96KN7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 SOX15-203ENST00000570788 1093 ntBASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 FAM21FP-204ENST00000608637 956 ntBASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 AC069544.1-201ENST00000609399 999 ntBASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPGRIP1Q96KN7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
RPGRIP1Q96KN7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.77■■□□□ 1.07
RPGRIP1Q96KN7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.77■■□□□ 1.07
RPGRIP1Q96KN7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.76■■□□□ 1.07
RPGRIP1Q96KN7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 AC100791.3-201ENST00000617619 330 ntBASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.75■■□□□ 1.07
RPGRIP1Q96KN7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 TSPY7P-201ENST00000431358 1114 ntBASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 CDV3P1-201ENST00000471403 739 ntBASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
RPGRIP1Q96KN7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RPGRIP1Q96KN7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms