Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD4Q96DM1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD4Q96DM1 AC116351.2-201ENST00000606540 1585 ntBASIC21.48■■□□□ 1.03
PGBD4Q96DM1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD4Q96DM1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD4Q96DM1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD4Q96DM1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PGBD4Q96DM1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD4Q96DM1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PGBD4Q96DM1 AC087499.1-201ENST00000418141 1075 ntBASIC21.48■■□□□ 1.03
PGBD4Q96DM1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD4Q96DM1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.48■■□□□ 1.03
PGBD4Q96DM1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD4Q96DM1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.48■■□□□ 1.03
PGBD4Q96DM1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.48■■□□□ 1.03
PGBD4Q96DM1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD4Q96DM1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD4Q96DM1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.48■■□□□ 1.03
PGBD4Q96DM1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PGBD4Q96DM1 KSR1P1-201ENST00000446298 240 ntBASIC21.47■■□□□ 1.03
PGBD4Q96DM1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.47■■□□□ 1.03
PGBD4Q96DM1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.47■■□□□ 1.03
PGBD4Q96DM1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.47■■□□□ 1.03
PGBD4Q96DM1 AC133561.5-201ENST00000635547 218 ntBASIC21.47■■□□□ 1.03
PGBD4Q96DM1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PGBD4Q96DM1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PGBD4Q96DM1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PGBD4Q96DM1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.47■■□□□ 1.03
PGBD4Q96DM1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.46■■□□□ 1.03
PGBD4Q96DM1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.46■■□□□ 1.03
PGBD4Q96DM1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PGBD4Q96DM1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PGBD4Q96DM1 NIFKP9-201ENST00000419265 221 ntBASIC21.46■■□□□ 1.03
PGBD4Q96DM1 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.46■■□□□ 1.03
PGBD4Q96DM1 NUDT16P1-203ENST00000513809 620 ntBASIC21.46■■□□□ 1.03
PGBD4Q96DM1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.46■■□□□ 1.03
PGBD4Q96DM1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.46■■□□□ 1.03
PGBD4Q96DM1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PGBD4Q96DM1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.46■■□□□ 1.03
PGBD4Q96DM1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PGBD4Q96DM1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.03
PGBD4Q96DM1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 TFP1-202ENST00000475455 1573 ntBASIC21.45■■□□□ 1.02
PGBD4Q96DM1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.45■■□□□ 1.02
PGBD4Q96DM1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 CR392000.1-201ENST00000624770 1228 ntBASIC21.44■■□□□ 1.02
PGBD4Q96DM1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 AC018553.1-201ENST00000616682 1458 ntBASIC21.44■■□□□ 1.02
PGBD4Q96DM1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PGBD4Q96DM1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PGBD4Q96DM1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PGBD4Q96DM1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
PGBD4Q96DM1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PGBD4Q96DM1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PGBD4Q96DM1 MMP23A-201ENST00000234610 1017 ntBASIC21.43■■□□□ 1.02
PGBD4Q96DM1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PGBD4Q96DM1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PGBD4Q96DM1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PGBD4Q96DM1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.43■■□□□ 1.02
PGBD4Q96DM1 YBX1P10-201ENST00000444752 975 ntBASIC21.43■■□□□ 1.02
PGBD4Q96DM1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms