Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 AC116407.4-201ENST00000623319 1061 ntBASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TRIM43Q96BQ3 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM43Q96BQ3 AC116351.2-201ENST00000606540 1585 ntBASIC21.61■■□□□ 1.05
TRIM43Q96BQ3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM43Q96BQ3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.61■■□□□ 1.05
TRIM43Q96BQ3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.61■■□□□ 1.05
TRIM43Q96BQ3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TRIM43Q96BQ3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM43Q96BQ3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM43Q96BQ3 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM43Q96BQ3 HOMER2P1-201ENST00000455653 964 ntBASIC21.61■■□□□ 1.05
TRIM43Q96BQ3 AL359075.1-203ENST00000462729 1002 ntBASIC21.61■■□□□ 1.05
TRIM43Q96BQ3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.61■■□□□ 1.05
TRIM43Q96BQ3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.61■■□□□ 1.05
TRIM43Q96BQ3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRIM43Q96BQ3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TRIM43Q96BQ3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 AL023803.3-201ENST00000615559 522 ntBASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM43Q96BQ3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 AL441883.1-201ENST00000566170 1045 ntBASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 HLA-A-209ENST00000638375 975 ntBASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM43Q96BQ3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 AC121338.2-201ENST00000622535 1744 ntBASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 AL031432.5-201ENST00000641059 760 ntBASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
TRIM43Q96BQ3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM43Q96BQ3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM43Q96BQ3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM43Q96BQ3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 AL023973.1-201ENST00000624619 620 ntBASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM43Q96BQ3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms