Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
APH1AQ96BI3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
APH1AQ96BI3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APH1AQ96BI3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APH1AQ96BI3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APH1AQ96BI3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.54■□□□□ 0.4
APH1AQ96BI3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.54■□□□□ 0.4
APH1AQ96BI3 C1QBPP2-201ENST00000528754 825 ntBASIC17.54■□□□□ 0.4
APH1AQ96BI3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.54■□□□□ 0.4
APH1AQ96BI3 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.54■□□□□ 0.4
APH1AQ96BI3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
APH1AQ96BI3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
APH1AQ96BI3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APH1AQ96BI3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.54■□□□□ 0.4
APH1AQ96BI3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APH1AQ96BI3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.54■□□□□ 0.4
APH1AQ96BI3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
APH1AQ96BI3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
APH1AQ96BI3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
APH1AQ96BI3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APH1AQ96BI3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
APH1AQ96BI3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.53■□□□□ 0.4
APH1AQ96BI3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
APH1AQ96BI3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
APH1AQ96BI3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APH1AQ96BI3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.53■□□□□ 0.4
APH1AQ96BI3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APH1AQ96BI3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.53■□□□□ 0.4
APH1AQ96BI3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
APH1AQ96BI3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
APH1AQ96BI3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.53■□□□□ 0.4
APH1AQ96BI3 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.53■□□□□ 0.4
APH1AQ96BI3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
APH1AQ96BI3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.53■□□□□ 0.4
APH1AQ96BI3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
APH1AQ96BI3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
APH1AQ96BI3 AC116351.2-201ENST00000606540 1585 ntBASIC17.53■□□□□ 0.4
APH1AQ96BI3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
APH1AQ96BI3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
APH1AQ96BI3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.52■□□□□ 0.4
APH1AQ96BI3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APH1AQ96BI3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
APH1AQ96BI3 AL391422.3-201ENST00000603791 2761 ntBASIC17.52■□□□□ 0.4
APH1AQ96BI3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APH1AQ96BI3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
APH1AQ96BI3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
APH1AQ96BI3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
APH1AQ96BI3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
APH1AQ96BI3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
APH1AQ96BI3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.52■□□□□ 0.4
APH1AQ96BI3 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.52■□□□□ 0.4
APH1AQ96BI3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APH1AQ96BI3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APH1AQ96BI3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
APH1AQ96BI3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.52■□□□□ 0.4
APH1AQ96BI3 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
APH1AQ96BI3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.52■□□□□ 0.4
APH1AQ96BI3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.52■□□□□ 0.4
APH1AQ96BI3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.52■□□□□ 0.4
APH1AQ96BI3 AC142381.4-202ENST00000563973 229 ntBASIC17.52■□□□□ 0.4
APH1AQ96BI3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.52■□□□□ 0.4
APH1AQ96BI3 FAM197Y4-202ENST00000622692 608 ntBASIC17.52■□□□□ 0.4
APH1AQ96BI3 AL023875.1-201ENST00000640777 796 ntBASIC17.52■□□□□ 0.4
APH1AQ96BI3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
APH1AQ96BI3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
APH1AQ96BI3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
APH1AQ96BI3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.52■□□□□ 0.39
APH1AQ96BI3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
APH1AQ96BI3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
APH1AQ96BI3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 AC018553.1-201ENST00000616682 1458 ntBASIC17.51■□□□□ 0.39
APH1AQ96BI3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 AL158047.1-201ENST00000445918 881 ntBASIC17.51■□□□□ 0.39
APH1AQ96BI3 AC098590.1-201ENST00000468126 897 ntBASIC17.51■□□□□ 0.39
APH1AQ96BI3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 RPPH1-201ENST00000516869 333 ntBASIC17.51■□□□□ 0.39
APH1AQ96BI3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APH1AQ96BI3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.51■□□□□ 0.39
APH1AQ96BI3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms