Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB40AQ8WXH6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 AC005181.1-201ENST00000604782 1256 ntBASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 KRT16P2-201ENST00000414673 1423 ntBASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 BX119927.1-201ENST00000636596 1552 ntBASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB40AQ8WXH6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 NCF1B-203ENST00000435988 1254 ntBASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 AC013268.1-206ENST00000638368 961 ntBASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 AC112229.1-201ENST00000639295 961 ntBASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 AIRN-201ENST00000601203 4374 ntBASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB40AQ8WXH6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 AC245052.3-201ENST00000450182 901 ntBASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 AC116050.2-201ENST00000612102 1779 ntBASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB40AQ8WXH6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40AQ8WXH6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB40AQ8WXH6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
RAB40AQ8WXH6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms