Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 AC009237.14-201ENST00000609975 1594 ntBASIC23.38■■□□□ 1.33
STAG1Q8WVM7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
STAG1Q8WVM7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 AC239809.2-201ENST00000415381 517 ntBASIC23.37■■□□□ 1.33
STAG1Q8WVM7 RPS2P4-201ENST00000476944 856 ntBASIC23.37■■□□□ 1.33
STAG1Q8WVM7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
STAG1Q8WVM7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 AC008550.1-201ENST00000511500 884 ntBASIC23.36■■□□□ 1.33
STAG1Q8WVM7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
STAG1Q8WVM7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 KRASP1-201ENST00000407852 552 ntBASIC23.35■■□□□ 1.33
STAG1Q8WVM7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
STAG1Q8WVM7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
STAG1Q8WVM7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.34■■□□□ 1.33
STAG1Q8WVM7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
STAG1Q8WVM7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
STAG1Q8WVM7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
STAG1Q8WVM7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
STAG1Q8WVM7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
STAG1Q8WVM7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
STAG1Q8WVM7 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.34■■□□□ 1.33
STAG1Q8WVM7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.34■■□□□ 1.33
STAG1Q8WVM7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.34■■□□□ 1.33
STAG1Q8WVM7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.34■■□□□ 1.33
STAG1Q8WVM7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
STAG1Q8WVM7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms