Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
TMC1Q8TDI8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
TMC1Q8TDI8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC27.58■■■□□ 2.01
TMC1Q8TDI8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
TMC1Q8TDI8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
TMC1Q8TDI8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
TMC1Q8TDI8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
TMC1Q8TDI8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC27.58■■■□□ 2.01
TMC1Q8TDI8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
TMC1Q8TDI8 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
TMC1Q8TDI8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC27.58■■■□□ 2.01
TMC1Q8TDI8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC27.58■■■□□ 2
TMC1Q8TDI8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC27.57■■■□□ 2
TMC1Q8TDI8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC27.57■■■□□ 2
TMC1Q8TDI8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TMC1Q8TDI8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TMC1Q8TDI8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TMC1Q8TDI8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC27.57■■■□□ 2
TMC1Q8TDI8 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TMC1Q8TDI8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC27.57■■■□□ 2
TMC1Q8TDI8 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC27.57■■■□□ 2
TMC1Q8TDI8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC27.57■■■□□ 2
TMC1Q8TDI8 AC092720.2-201ENST00000602388 1665 ntBASIC27.57■■■□□ 2
TMC1Q8TDI8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC27.57■■■□□ 2
TMC1Q8TDI8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
TMC1Q8TDI8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC27.57■■■□□ 2
TMC1Q8TDI8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
TMC1Q8TDI8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
TMC1Q8TDI8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC27.56■■■□□ 2
TMC1Q8TDI8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
TMC1Q8TDI8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TMC1Q8TDI8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TMC1Q8TDI8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC27.56■■■□□ 2
TMC1Q8TDI8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TMC1Q8TDI8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TMC1Q8TDI8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC27.56■■■□□ 2
TMC1Q8TDI8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC27.56■■■□□ 2
TMC1Q8TDI8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC27.56■■■□□ 2
TMC1Q8TDI8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC27.56■■■□□ 2
TMC1Q8TDI8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC27.56■■■□□ 2
TMC1Q8TDI8 MAX-217ENST00000557277 728 ntTSL 3 BASIC27.56■■■□□ 2
TMC1Q8TDI8 RARRES2P10-201ENST00000564312 460 ntBASIC27.56■■■□□ 2
TMC1Q8TDI8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC27.56■■■□□ 2
TMC1Q8TDI8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TMC1Q8TDI8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
TMC1Q8TDI8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC27.56■■■□□ 2
TMC1Q8TDI8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC27.55■■■□□ 2
TMC1Q8TDI8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC27.55■■■□□ 2
TMC1Q8TDI8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TMC1Q8TDI8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TMC1Q8TDI8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC27.55■■■□□ 2
TMC1Q8TDI8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TMC1Q8TDI8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC27.55■■■□□ 2
TMC1Q8TDI8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC27.55■■■□□ 2
TMC1Q8TDI8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TMC1Q8TDI8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC27.55■■■□□ 2
TMC1Q8TDI8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
TMC1Q8TDI8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC27.55■■■□□ 2
TMC1Q8TDI8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
TMC1Q8TDI8 AC113410.3-201ENST00000623366 203 ntBASIC27.55■■■□□ 2
TMC1Q8TDI8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
TMC1Q8TDI8 AL135905.2-201ENST00000584934 1404 ntBASIC27.55■■■□□ 2
TMC1Q8TDI8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC27.55■■■□□ 2
TMC1Q8TDI8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC27.55■■■□□ 2
TMC1Q8TDI8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC27.55■■■□□ 2
TMC1Q8TDI8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
TMC1Q8TDI8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC27.54■■■□□ 2
TMC1Q8TDI8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC27.54■■■□□ 2
TMC1Q8TDI8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC27.54■■■□□ 2
TMC1Q8TDI8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC27.54■■■□□ 2
TMC1Q8TDI8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC27.54■■■□□ 2
TMC1Q8TDI8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC27.54■■■□□ 2
TMC1Q8TDI8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC27.54■■■□□ 2
TMC1Q8TDI8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC27.54■■■□□ 2
TMC1Q8TDI8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC27.54■■■□□ 2
TMC1Q8TDI8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC27.54■■■□□ 2
TMC1Q8TDI8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC27.54■■■□□ 2
TMC1Q8TDI8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC27.54■■■□□ 2
TMC1Q8TDI8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC27.54■■■□□ 2
TMC1Q8TDI8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC27.53■■■□□ 2
TMC1Q8TDI8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
TMC1Q8TDI8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC27.53■■■□□ 2
TMC1Q8TDI8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TMC1Q8TDI8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
TMC1Q8TDI8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TMC1Q8TDI8 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
TMC1Q8TDI8 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC27.53■■■□□ 2
TMC1Q8TDI8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC27.53■■■□□ 2
TMC1Q8TDI8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC27.53■■■□□ 2
TMC1Q8TDI8 AP001412.1-201ENST00000608405 714 ntBASIC27.53■■■□□ 2
TMC1Q8TDI8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
TMC1Q8TDI8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC27.53■■■□□ 2
TMC1Q8TDI8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
TMC1Q8TDI8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC27.53■■■□□ 2
TMC1Q8TDI8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC27.52■■■□□ 2
TMC1Q8TDI8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC27.52■■■□□ 2
TMC1Q8TDI8 AL512408.1-201ENST00000569378 2000 ntBASIC27.52■■■□□ 2
TMC1Q8TDI8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC27.52■■■□□ 2
TMC1Q8TDI8 HTR7P1-201ENST00000538670 1336 ntBASIC27.52■■■□□ 2
TMC1Q8TDI8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms